Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00055942-protein ID=TCONS_00055942-protein|Name=TCONS_00055942-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2162bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00055942-protein vs. Swiss-Prot (Human)
Match: AGRIN (Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5) HSP 1 Score: 132.494 bits (332), Expect = 1.545e-30 Identity = 128/494 (25.91%), Postives = 185/494 (37.45%), Query Frame = 0 Query: 1761 VCGSDGQTHSNNCEMEMKACVKSSKIFKMHDGECGKC-------------------------VKVCPFNYEPQCGTDGKNYDNQCIMQQKTCQTGGKVGLAYEGEC-GNPACPD----------------------SCDSADKEQVCGSDGNTYESFCKLQQKSCATGSVVKFKHFGKC--------------------------VKCSPICNKMWDPYCGTDDRTYGNECMMNFGTCRSGGRVQLKHHGKCKEP----------------TCPLKCPSDRNRVCGTNGKTYASLCRLQQDTCRDESIVLRHTXSLCRLQQDTCRDESIVLRHTGPCANRCRVNKRCGFRYR-PVCGTDSKTYANHCELRKAMCISNGKIRKAHSGRCKKCSRGQPKVRCVSNPCAGAYCPKYPRAQCVANYCGSCNAQFYMRGKRIEDCGTKCSEAC-TREFSPICGSDGRTYGNPCTMAVATCKSKGAISMSYVGPCRMKYY 2162 VCGSDG + C++ +AC + +FK DG C C + CP P CG DG Y+N C+M + G + G+C G CP+ +CD A + VC DG TY+S C QQ C + KH G C +C C+ ++DP CG+D TYG+ C + C G +Q+ G C CP +C + VCG++G TY S C L C + + + C +TC D V C+ V RC PVCG+D TY + CELR+A C+ +I +A +G C++ C C C + + + ED C +C + SP+CGSDG TY C + A C+S+ + ++ G CR + Sbjct: 284 VCGSDGADYPGECQLLRRACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARQAPVCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRFNAVCLSRRGRPRCSCDRVTCDGAYRP-VCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCAVKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPC----ETCGD--AVCAFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYGSACELREAACLQQTQIEEARAGPCEQAE------------CGSGGSGSGEDGDCEQEL---CRQRGGIWDEDSEDGPCVCDFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACRGPTF 755 HSP 2 Score: 119.013 bits (297), Expect = 2.042e-26 Identity = 121/455 (26.59%), Postives = 164/455 (36.04%), Query Frame = 0 Query: 1754 CPAVYEPVCGSDGQTHSNNCEMEMKACVKSSKIFKMHDGECGKCVKVCPFNYEPQCGTDGKNYDNQCIMQQKTCQTGGKVGLAYEGECGNPACPDSCDSADKEQVCGSDGNTYESFCKLQQKSCATGSVVKFKHFGKCVKCSPI-------------------------CNKMWDPYCGTDDRTYGNECMMNFGTCRSGGRVQLKHHGKCK-EPTCP------LKCPSDRNR----------------VCGTNGKTYASLCRLQQDTCRDESIVLRHTXSLCRLQQDTCRDESIVLRHTGPCAN---RCRVNKRCGFRYRPVCGTDSKTYANHCELRKAMCISNGKIRKAHSGRCKKCSRGQPKVRCVSNPCAGAYCPKYPRAQCVANYCGSCNAQFYMRGKRIEDCGTKCSEACTREFSPICGSDGRTYGNPCTMAVATCKSKGAISMSYVGPC 2157 CP+V PVCGSD T+SN CE++ C + +I + G CG + C TC G + +G + CP +C A + VCGSDG Y C+L +++CA V K G C C C P CG D TY N+C+M G +Q G+C+ CP C S R R VC +G+TY S C QQ CR + + C C T N C + C Y PVCG+D TY + CEL C +I+ A G C +C GQ + GA C + +CV C C P+CGSDG TY + C + V C + ++ ++ GPC Sbjct: 202 CPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPCGS--------------------RDPC--SNVTCSFGSTCARSADGLTASCLCPATCRGAPEGTVCGSDGADYPGECQLLRRACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARQAPVCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRFNAVCLSRRGRPRCSCDRVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCAVKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRC--GQCRF--------GALC-EAETGRCV------------------------CPSECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPC 599 HSP 3 Score: 97.8265 bits (242), Expect = 5.171e-20 Identity = 130/527 (24.67%), Postives = 188/527 (35.67%), Query Frame = 0 Query: 1516 FCGSDGKTYSNEC-LLKVAQCENNKIILQNQGPCVDKDLTPCQNEV----RSAENGP------LLI------GSYKPQCDESGAYKQIQC-HGSTGYCWCVDKKGVKKQGTEKAPGQGQPNCYDDEESN---LSREQR----CMRV-CTFEYDPVCASNRQTMANKCVFNYQKCLDN-SLTIKHTGQCSECPRNVPIVTCAVNPCDTSTCPAFPKARCQGNYCGGCNAEFFVNDKKVDCLIRPEPRSLIKPFAAAGPSVPQCSMICPAVYEPVCGSDGQTHSNNCEMEMKACVKSSKIFKMHDGECGKCVK--------------VCPFN----YEPQCGTDGKNYDNQCIMQQKTCQTGGKVGLAYEGEC----------------GNPACPDSCDSADKEQVCGSDGNTYESFCKLQQKSCATGSVVKFKHFGKCVKCS----------------PICNK---MWD--------------------PYCGTDDRTYGNECMMNFGTCRSGGRVQLKHHGKCKEPT 1942 CGSDG Y EC LL+ A + + GPC PCQ + RS P +L+ P C + G + C G +G +G+ Q QG+ C + N LSR R C RV C Y PVCA + +T + C +C ++ KH G C + P V CA +TC V + + C +C C ++Y+PVCGSDG T+ + CE+E AC +I G C +C + VCP +P CG+DG Y ++C++ C + +A G C G CP C+ VCGSDG TY S C+L++ +C + ++ G C + +C + +WD P CG+D TY EC + C S + + G C+ PT Sbjct: 284 VCGSDGADYPGECQLLRRACARQENVFKKFDGPC-----DPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARQAPVCGDDGVTYENDCVMGRSGA-----ARGLLLQKVRSGQCQGRDQCPEPCRFNAVCLSRRGRPRCSCDRVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFG----ATC--------------------AVKNGQAAC---------------------ECLQACSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCETCGDAVCAFGAVCSAGQCVCP-RCEHPPPGPVCGSDGVTYGSACELREAACLQQTQIEEARAGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGPCVCDFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACRGPT 754 The following BLAST results are available for this feature:
BLAST of TCONS_00055942-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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