TCONS_00056005-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056005-protein
Unique NameTCONS_00056005-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056005-protein ID=TCONS_00056005-protein|Name=TCONS_00056005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MDWVKFLGFLGLLLETLTLVVANKKQDEDTGVFSMHTSHSLPVYHAFGTE
DEFTLRSNILFKTSKVTTAVLNKETRLSPTEVDKLKKLVDEDGFYFIRTP
TKLKTNLHDETNTPDERFVSTFVPACYLYGSSLNELIKVAVDHMGNVIGL
SIVSPRHDCAVAQLKDIDDDVTFNSTVLINHQVPGAVPDTQSFIKKIEND
KKEQADGKGKDNRSFFAKYWMYIVPVVLVLMLSSQAEPEGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035246XLOC_035246Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056005TCONS_00056005Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00056005-protein vs. Swiss-Prot (Human)
Match: EMC10 (ER membrane protein complex subunit 10 OS=Homo sapiens GN=EMC10 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.121e-29
Identity = 63/192 (32.81%), Postives = 111/192 (57.81%), Query Frame = 0 
Query:   45 HAFGTEDE--FTLRSNILFKTSKVTTAVLNKETRLSPTEVDKLKKLVDEDGFYFIRTPTKLKTNLHDETNTPDERFVSTFVPACYLYGSSLNELIKVAVDHMGNVIGLSIVSPRHDCAVAQLKDIDDDVTFNSTVLINHQVPGAVPDTQSFIKKIENDKKEQADGKGKDNRSFFAKYWMYIVPVVLVLMLSS 234
            H+F  +D   F  R ++L+     T ++  ++  LS  E  +L+ +   +G Y +R P +       E       +VS+FVPAC L  S L++ + + VD  GNV+G+S+V+    C   +++D+D ++ FN++V +        P+T +FI+++E ++ ++A    ++ +SFFAKYWMYI+PVVL LM+S 
Sbjct:   58 HSFEIDDSANFRKRGSLLWNQQDGTLSLSQRQ--LSEEERGRLRDVAALNGLYRVRIPRRPGALDGLEAGG----YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLEL-FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWMYIIPVVLFLMMSG 241
The following BLAST results are available for this feature:
BLAST of TCONS_00056005-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EMC104.121e-2932.81ER membrane protein complex subunit 10 OS=Homo sap... [more]
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