TCONS_00056031-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056031-protein
Unique NameTCONS_00056031-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length215

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056031-protein ID=TCONS_00056031-protein|Name=TCONS_00056031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
LVGNRYLPPNPETNTEQLLLYILSMFHSRAFLHMRFPPRGSVACLKAINQ
DYYTISFRIHAEFQLNEPPLFPFWFTPASFIGEIIIKKDGTHIQHFDLKL
PTRKQLNIDMEWMTSPPKTDGSHGQEVDIGFCPLMRITSTEPSIALSELS
NSEEKVIVWDEILDDQAVFDIMEQDFYPFKKIPYLDFNKTFERAVKEKKL
IHHITLWGALDDQSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035255XLOC_035255Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056031TCONS_00056031Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00056031-protein vs. Swiss-Prot (Human)
Match: SELN (Selenoprotein N OS=Homo sapiens GN=SELENON PE=1 SV=5)

HSP 1 Score: 204.912 bits (520), Expect = 7.797e-63
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 0 
Query:    1 LVGNRYLPPNPETNTEQLLLYILSMFHSRAFLHMRFPPRGSVACLKAINQDYYTISFRIHAEFQLNEPPLFPFWFTPASFIGEIIIKKDGTHIQHFDLKLPTRKQLNIDMEWMTSPPKTDGSHGQEVDIGFCPLMRITSTEPSIAL-----------SELSNSEEKVIVWDEI-----LDDQAVFDIMEQDFYPFKKIPYLDFNKTFERAVKEKKLIHHITLWGALDDQSC 215
            L  NR+ PP P+   E ++  +LSMFH R F+  RF P+G+VACL AI+  YYT+ FRIHAEFQL+EPP FPFWF+PA F G II+ KD TH++ F L +P  + LN+DMEW+        S   EVDIG+ P M + +T PS+             S L + E    V++EI     L  +     +E   YPFKK+ YL F + F+RA  E KL+H I LWGALDDQSC
Sbjct:  235 LSNNRFYPPPPK-GKEVIIHRLLSMFHPRPFVKTRFAPQGAVACLTAISDFYYTVMFRIHAEFQLSEPPDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNHRSLNVDMEWLYG---ASESSNMEVDIGYIPQMELEATGPSVPSVILDEDGSMIDSHLPSGEPLQFVFEEIKWQQELSWEEAARRLEVAMYPFKKVSYLPFTEAFDRAKAENKLVHSILLWGALDDQSC 461
The following BLAST results are available for this feature:
BLAST of TCONS_00056031-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SELN7.797e-6346.75Selenoprotein N OS=Homo sapiens GN=SELENON PE=1 SV... [more]
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