TCONS_00056111-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056111-protein
Unique NameTCONS_00056111-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056111-protein ID=TCONS_00056111-protein|Name=TCONS_00056111-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
KFNTMKSLAVLICLALALGSSHQQPTGCFPTNWNHRWVRVNANLWLTQLD
TRRPWHEQAMKCQSIEPGNKTNFARADTKEVQSVMSHRFDNDVWIGGFEV
GNSGAWYWFGRGAHLCETQRVTGSYWSAVAKPDAGQHSDWHCMLSRNYGS
VKGWYYASCTNPKKAVCELRC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035313XLOC_035313Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056111TCONS_00056111Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 53..168
e-value: 2.2E-5
score: 25.0
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 40..168
score: 12.378
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 17..171
e-value: 6.2E-9
score: 35.5
NoneNo IPR availableCDDcd00037CLECTcoord: 81..168
e-value: 4.9695E-4
score: 35.6734
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 50..169

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056111-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top