TCONS_00056356-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056356-protein
Unique Name	TCONS_00056356-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1092

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056356-protein ID=TCONS_00056356-protein|Name=TCONS_00056356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1092bp
MADQVQQFHELVRSLMSADNETRNNAESQYFNIDEPTRLQFLLQCVIAGD
AIELRTMAAVLFRRLLSNIDDFAGTVPANVQDICKSQLIEAAHKEQDESM
RKKISDSIAELAKCYLGEDGNNQWPDILKFLYECCNSDQNTMKEVALHII
IAFPGIFGTQQDTYIQVIKEMLVTCIQPPNADKVRLLSARAAATFITECL
GEAKFKSFAELYPGILEAIGIAVKSEGDDNVLKSFVEMVEVAPKLVKQNL
HGTLGMMLEILANTNLENSWRHLALETIVTLSETAPAMIRKNSADMIPKI
IPEILALMVDLDEDEDWSFSDDIEDTDMESNPVAGESSLDRFTCALGGKA
VLPHIIATIPPMLEHADWRYRHAALMAVSAIAEGCAKQMEPLLANVVDSV
LPFLQDPHPRVRHASCNALGQLATDFTVLFQKKFHAKVMPGLVNLLLTDS
AHPRVQAHAAAAMVNFCEDCPPKIIEPYLDSLVDALENVLSSKLEELLKR
GVKLVLEQVLTTIATVADTAESRFIKYYDRFMPSLKYIFQNATQKDYRLL
RGKTIECISLIGLAVGAEKFLPDASEVMQLLLKTQTDASDFDDDDPQVSY
LISAWARMCKIIGKDFVQYLPVVMPPVLKAAQIKPEVALLDLDDPQHQNV
NEDDGWEFVNLGEQQKFGIKTAGLEDKSTACQMLVHYARELKDGFVDYTE
QVVKIMVPLLKFYFHDTVRVTAAESLPHLLECAKVRGDEYLSQMWSFIAT
ELLTSIEREPEEAVVPEMMESFAKCIEVLGIGHLAPDTLTQLGQIMHDKL
EQHSERQHERHDKRNDEDYDEEVEEGLQDEHETDEYILSKVSDIMHALFK
THKEIALPFFEQMLPDFCKLMTPQRPASDRQWALCIFDDLLEYTGPVSWK
YQGYFLKELINSIQDLSSEVRQAAAYGCGVMAQFGGNDYAEACAKAVPLL
VTVIEHAESRAKENVNPTENCISAVTKICKHNSSMINANEVITKWLSWLP
VTEDQEEAPHVYGYLCDLIEANHPQVLGESNSNLPSIVKIITEAIAADVF
EQYPDSATRIKAILATVQQNEPVWAACLSMLDERQLEALKNF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035506	XLOC_035506	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056356	TCONS_00056356	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR034085	TOG
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034085	TOG domain	SMART	SM01349	TOG_3	coord: 338..597 e-value: 0.0027 score: 20.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..646 e-value: 5.4E-79 score: 265.8 coord: 669..1092 e-value: 2.3E-48 score: 164.5
None	No IPR available	PFAM	PF13513	HEAT_EZ	coord: 368..422 e-value: 1.6E-11 score: 44.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 801..830
None	No IPR available	CDD	cd00020	ARM	coord: 353..468 e-value: 2.52819E-10 score: 58.0947
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 675..761 coord: 811..902 coord: 6..636
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 749..798 coord: 833..1042

Blast

[Close]

BLAST of TCONS_00056356-protein vs. Swiss-Prot (Human)
Match: IPO5 (Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4)

HSP 1 Score: 1234.17 bits (3192), Expect = 0.000e+0
Identity = 616/1088 (56.62%), Postives = 793/1088 (72.89%), Query Frame = 0

Query:    6 QQFHELVRSLMSADNETRNNAESQYFNIDEPTRLQFLLQCVIAGDAIE-LRTMAAVLFRRLLSN-IDDFAGTVPANVQDICKSQLIEAAHKEQDESMRKKISDSIAELAKCYLGEDGNNQWPDILKFLYECCNSDQNTMKEVALHIIIAFPGIFGTQQDTYIQVIKEMLVTCIQPPNADKVRLLSARAAATFI-TECLGEAKFKSFAELYPGILEAIGIAVKSEGDDNVLKSFVEMVEVAPKLVKQNLHGTLGMMLEILANTNLENSWRHLALETIVTLSETAPAMIRKNSADMIPKIIPEILALMVDLDEDEDWSFSDDIEDTDMESNPVAGESSLDRFTCALGGKAVLPHIIATIPPMLEHADWRYRHAALMAVSAIAEGCAKQMEPLLANVVDSVLPFLQDPHPRVRHASCNALGQLATDFTVLFQKKFHAKVMPGLVNLLLTDSAHPRVQAHAAAAMVNFCEDCPPKIIEPYLDSLVDALENVLSSKLEELLKRGVKLVLEQVLTTIATVADTAESRFIKYYDRFMPSLKYIFQNATQKDYRLLRGKTIECISLIGLAVGAEKFLPDASEVMQLLLKTQTDASDFDDDDPQVSYLISAWARMCKIIGKDFVQYLPVVMPPVLKAAQIKPEVALLDLDDPQHQNVNEDDGWEFVNLGEQQKFGIKTAGLEDKSTACQMLVHYARELKDGFVDYTEQVVKIMVPLLKFYFHDTVRVTAAESLPHLLECAKVRGDEYLSQMWSFIATELLTSIEREPEEAVVPEMMESFAKCIEVLGIGHLAPDTLTQLGQIMHDKLEQHSERQHERHDKRNDEDYDEEVEEGLQDEHETDEYILSKVSDIMHALFKTHKEIALPFFEQMLPDFCKLMTPQRPASDRQWALCIFDDLLEYTGPVSWKYQGYFLKELINSIQDLSSEVRQAAAYGCGVMAQFGGNDYAEACAKAVPLLVTVIEHAESRAKENVNPTENCISAVTKICKHNSSMINANEVITKWLSWLPVTEDQEEAPHVYGYLCDLIEANHPQVLGESNSNLPSIVKIITEAIAADVFEQYPDSATRIKAILATVQQNEPVWAACLSMLDERQLEALK 1090
            QQF+ L+ +L+S DN  R  AE  Y NI   +++ FLLQ +    A E  R MAAVL RRLLS+  D+    +P++VQ   KS+L+     E   SMRKK+ D  AELA+  + EDGNNQWP+ LKFL++  +S    ++E ALHI   FPGIFG QQ  Y+ VIK MLV C+Q      +R LSARA A FI       A FK FA+L PG L+A+  +   + DD+VLKS VE+ +  PK ++ +L  TL + L++  +T+L N  R LALE IVTLSETA AM+RK++ +++ + IP++LA+MVDL+EDEDW+ +D++ED D +SN VAGES+LDR  C LGGK VLP I   I  ML++ DW+YRHA LMA+SAI EGC +QME +L  +V+ VL FLQDPHPRVR+A+CNA+GQ+ATDF   FQKKFH KV+  L+  +  D  + RVQAHAAAA++NF EDCP  ++ PYLD+LV  L +++  KL+EL+++G KLVLEQV+T+IA+VADTAE +F+ YYD FMPSLK+I +NA QK+ RLLRGKTIECISLIGLAVG EKF+ DAS+VMQLLLKTQTD +D +DDDPQ+SY+ISAWARMCKI+GK+F QYLPVVM P++K A IKPEVALLD  D   +N+++DDGWEFVNLG+QQ FGIKTAGLE+KSTACQMLV YA+ELK+GFV+YTEQVVK+MVPLLKFYFHD VRV AAES+P LLECA+VRG EYL+QMW F+   L+ +I  EP+  V+ E+M SFAKCIEV+G G L  +   +LG I+  KLE+H + Q  R  KR DEDYDE+VEE LQDE + D YIL+KVSDI+H++F ++KE  LP+FEQ+LP    L+ P RP  DRQW LCIFDD++E+  P S+KY  YFL+ ++  + D S EVRQAAAYG GVMAQ+GG++Y   C +A+PLLV VI+ A+S+ KENVN TENCISAV KI K     +N  EV+  WLSWLP+ ED+EEA   + YLCDLIE+NHP VLG +N+NLP I  II E    +  +     A R+  ++  VQ +  +W  C++ L   Q  A++
Sbjct:    9 QQFYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSC-YQNDDSVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAAAMLRKHT-NIVAQTIPQMLAMMVDLEEDEDWANADELEDDDFDSNAVAGESALDRMACGLGGKLVLPMIKEHIMQMLQNPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTM-EDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENAVQKELRLLRGKTIECISLIGLAVGKEKFMQDASDVMQLLLKTQTDFNDMEDDDPQISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQD--MENMSDDDGWEFVNLGDQQSFGIKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHDGVRVAAAESMPLLLECARVRGPEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEELGGILKAKLEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIAEGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQ 1091

The following BLAST results are available for this feature:

BLAST of TCONS_00056356-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056356-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IPO5	0.000e+0	56.62	Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4	[more]

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TCONS_00056356-protein (polypeptide) - C. hemisphaerica