TCONS_00056607-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056607-protein
Unique NameTCONS_00056607-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length994

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056607-protein ID=TCONS_00056607-protein|Name=TCONS_00056607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=994bp
MEEQKIFGDVQTQQKFEIYYNHKENELDKKQQLIIERDERAVGEENNEEE
DEKDQTANESSPSDYEFSLREENIRLKSKLEQAKEKALYFQNQLQKRKDE
LYQERELCEKANKKIYALLSEKSSLEDDFKRRSNEQNYEEVIRKLEHEIY
ALEERLEKQRRRHHHEHLMIYDDLKEERRKQTEWKQTYLRSQVSVMAFRR
KLQLLRDYLQGDHFEELMKCLEVGLNEHEEDKDDDQSQDQNQNNIDCYTV
SPSTEVVHMNDSHLDPIPSVHEIKVEERPSSPTPFSHHDERDQSRYHQTT
EYNVLASRDHERTPAHEVERSRDTNSASRDEIALVRAQEDNHRSRDETRE
SRERLNLMERMRADKHTPYDRFTVSPHERTSRDHNNGSHDSARDSAFDHD
AFFRSKLSRRHHAPERPHHSPQALPDHSEHREHHSFNSHDHESHVSQERR
RQDHEPSHETEQEHHPPKVFVVDENKPQTITHTTGSSPTPPAGRHSASNG
SKQEYSKQDFSSRDYYESKSTRDHHQHHQNHHKHQGQPIKSWTEYEFPSS
TDRPSNHYKHWHHYSVSESSRPSLIQNDSEHHSTYERNKNVPKNYYESMP
ADAGNNEFLELKFDQRHHPRGYPDTSSTTKISQHKTYPRLFETTTSSRPQ
PLPVGTPLEEKKIWCLTCDGEVTKKPCGHSSLVVQEREKEFPCPTCRRVF
NNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCP
YCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVIS
PTSIQQMISSHHSSIKTAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKV
FTRKSHLTRHKLTHDQIKIYCDCGRLFRQKAHLQAHLPACKRKREAVEAK
YLSENESGGIPGRHVMLQQDSPASMSEEKDSPQSIHLGHDIINEESLPME
YEHQTHGQPSHDINENERAREGDLAPIDIKNLPVGLPPLIRDPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035651XLOC_035651Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056607TCONS_00056607Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..111
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableCOILSCoilCoilcoord: 135..162
NoneNo IPR availableGENE3D3.30.160.60coord: 725..739
e-value: 3.8E-13
score: 48.8
NoneNo IPR availableGENE3D3.30.160.60coord: 885..939
e-value: 0.26
score: 11.0
NoneNo IPR availableGENE3D3.30.160.60coord: 753..794
e-value: 3.2E-13
score: 48.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 691..713
e-value: 7.6E-4
score: 19.7
coord: 747..769
e-value: 5.4E-6
score: 26.5
coord: 842..864
e-value: 7.6E-6
score: 26.0
coord: 721..741
e-value: 4.0E-5
score: 23.8
NoneNo IPR availableGENE3D3.30.160.60coord: 521..703
e-value: 7.4E-11
score: 41.5
NoneNo IPR availableGENE3D3.30.160.60coord: 798..855
e-value: 5.5E-9
score: 35.5
NoneNo IPR availableGENE3D2.20.25.10coord: 740..752
e-value: 3.2E-4
score: 20.1
NoneNo IPR availableGENE3D3.30.160.60coord: 856..884
e-value: 1.7E-11
score: 43.9
coord: 704..724
e-value: 4.0E-16
score: 58.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..540
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 719..741
e-value: 6.3E-4
score: 29.0
coord: 691..713
e-value: 0.002
score: 27.4
coord: 747..769
e-value: 5.3E-5
score: 32.6
coord: 842..864
e-value: 6.1E-4
score: 29.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 749..769
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 844..864
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 693..713
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 721..741
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 747..774
score: 12.923
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 719..746
score: 15.687
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 691..718
score: 15.583
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 842..869
score: 13.256
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 838..886
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 717..769
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 685..728

Blast
BLAST of TCONS_00056607-protein vs. Swiss-Prot (Human)
Match: ZN347 (Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.183e-28
Identity = 77/213 (36.15%), Postives = 105/213 (49.30%), Query Frame = 0
Query:  684 VQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIK--------TAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHDQIKIY-CD-CGRLFRQKAHLQAH 886
            +   EK + C  C + F  RS L  H +IH+GEKP+ C  C K F R SHL RH L HTGEKP+KC  CGK F  +S+L  H+ +H                 E+P   +    V +  S        H+ +K         A  V+SS   + +I       E  + CN+CGKVFT+ SHL RH+  H   K Y C+ CG++FR  ++L  H
Sbjct:  422 IHTGEKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPYKCNECGKAFRAHSNLTTHQVIHTG---------------EKPYKCNECGKVFTQNSHLANHQRIHTGVKPYMCNECGKAFSVYSSLTTHQVI----HTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRH 615          

HSP 2 Score: 113.62 bits (283), Expect = 1.527e-25
Identity = 78/218 (35.78%), Postives = 104/218 (47.71%), Query Frame = 0
Query:  683 VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKT------------AVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHDQIKIY-CD-CGRLFRQKAHLQAH 886
            V+   EK + C  C +VF+  S L +H  IH+GEKP+ C  C K F + SHL RH   HTGEKP+KC  CGK F   S L  H+  H                 E+P   +    V +    Q    ++H  I T            A  V SS A +++I       E  + C++CGKVF R SHL RH+L H   K Y C+ CG+ FR  ++L  H
Sbjct:  309 VIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPYKCNECGKAFRARSSLAIHQATHSG---------------EKPYKCNECGKVFT----QNSHLTNHWRIHTGEKPYKCNECGKAFGVRSSLAIHLVI----HTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPYKCNECGKAFRAHSNLTTH 503          

HSP 3 Score: 107.071 bits (266), Expect = 1.710e-23
Identity = 83/242 (34.30%), Postives = 105/242 (43.39%), Query Frame = 0
Query:  683 VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNR----------------------------HVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIK--------TAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHDQIKIY-CD-CGRLFRQKAHLQAH 886
            V+   EK + C  C +VF   SHL RH  IH+GEKP+ C  C K F   S+L+R                            H + HTGEKP+KC  CGK F  NS L RH++VH  T G             +P   +      S TS        H+  K         A  V SS   +  I   KK     + CN+CGKVFT+ SHL RH+  H   K Y C+ CG+ F Q + L  H
Sbjct:  561 VIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPYKYNEYGKAFSEHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRVH--TGG-------------KPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK----PYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKAFSQTSKLARH 783          

HSP 4 Score: 105.531 bits (262), Expect = 4.596e-23
Identity = 70/200 (35.00%), Postives = 94/200 (47.00%), Query Frame = 0
Query:  689 KEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKTAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHDQIKIY-CD-CGRLFRQKAHLQAH 886
            K + C  C + F+  S L  H +IH+GEKP+ C  C K F + SHL RH   HTGEKP+KC  CGK F  NS L RH+++H                 E+P   +      S           HS++ T   + +               E  + CN+CGKVFT+ SHL RH+  H   K Y C+ CG+ F Q + L  H
Sbjct:  539 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTG---------------EKPYKYNEYGKAFSE----------HSNLTTHQVIHT--------------GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARH 699          

HSP 5 Score: 98.5969 bits (244), Expect = 6.874e-21
Identity = 67/212 (31.60%), Postives = 94/212 (44.34%), Query Frame = 0
Query:  679 HSSL----VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKTAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHDQIKIYCDCGRLFRQKAHLQAH 886
            HS+L    V+   EK + C  C +VF   SHL RH  +H+G KP+ C  C K F++ S L RH   HTGEKP++C  CGK F+  S L  H+ +H                 ++P   +    V +    Q    + H  I T                     E  + CN+CGK F++ S L RH+  H   K Y +CG+ F   + L  H
Sbjct:  637 HSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFSVRSSLTTHQAIHTG---------------KKPYKCNECGKVFT----QNSHLARHRGIHTG--------------------EKPYKCNECGKAFSQTSKLARHQRIHTGEKPY-ECGKPFSICSSLTTH 808          
The following BLAST results are available for this feature:
BLAST of TCONS_00056607-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3477.183e-2836.15Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 ... [more]
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