TCONS_00056767-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056767-protein
Unique NameTCONS_00056767-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length563

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056767-protein ID=TCONS_00056767-protein|Name=TCONS_00056767-protein|organism=Clytia hemisphaerica|type=polypeptide|length=563bp
MFQGQRSNGRGRDQTRGRERSRGKGRGHVGRVSSRQQGSDVGRGSNTKES
MKPAAQRRNSKPSVKSRQKESHTKEDHQQNQSCESKQSNKFRSRKQKESQ
PEKTTGSIAMKKDYHKSGSVAGQSSGKADCILSNSFGCENINWSSKELIK
FCEKNFVMFIMRGVPGSGKSTLAQKVKSFYGGRDAIICSADDYRYNRKGE
YIFSVDQLYKTHLQCQNKAETYCSKQIHVIIIDNTNIHSKDCNPYLTLAK
KYNYFVIFLKMKAQGVDHHVQYNTHQVPRDTIAKMILSYGSNPLPYYFNW
AVPNSEGVRLRNVTQRLIQSCMKADSHFSNFLTNEMKTSSQNLFKTFHLQ
NASSHHYHATVAYTNQYNVPTKISDKYTKSATVKNALGSVTFLQIAGVYI
TPKCIAARLLLTEEQKKLWGRNDSLNRGEINPIAFESNKVMEGSLEKMLC
DLHLNNKHMNEDTVTFQVPPGCTEPSHSLGCTAHITLGTRGNNKPVIAKD
TLYQIVHLEAYTLPKSETLTSGNLVIRCYGDDKWVIYFRHPFIAQALFCG
HYDLMKNTGCPKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035756XLOC_035756Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056767TCONS_00056767Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008431CNPase
IPR027417P-loop_NTPase
IPR009097cNuc_Pdiesterase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009214cyclic nucleotide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00041132',3'-cyclic-nucleotide 3'-phosphodiesterase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009214 cyclic nucleotide catabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1740.10coord: 297..546
e-value: 2.3E-30
score: 105.3
NoneNo IPR availableGENE3D3.40.50.300coord: 157..281
e-value: 1.8E-15
score: 56.9
NoneNo IPR availablePFAMPF13671AAA_33coord: 158..255
e-value: 2.4E-7
score: 30.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
IPR008431Cyclic nucleotide phosphodiesterasePFAMPF05881CNPasecoord: 294..423
e-value: 6.9E-11
score: 42.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 159..260
IPR009097Cyclic phosphodiesteraseSUPERFAMILY55144LigT-likecoord: 293..427
coord: 473..552

Blast
[Close]
BLAST of TCONS_00056767-protein vs. Swiss-Prot (Human)
Match: CN37 (2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Homo sapiens GN=CNP PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.686e-19
Identity = 73/286 (25.52%), Postives = 127/286 (44.41%), Query Frame = 0 
Query:  158 MFIMRGVPGSGKSTLAQKVKSFYGGRDAI-ICSADDYRYNRKGEYIFSVDQLYKTHLQCQNKAETYCSKQ-IHVIIIDNTNIHSKDCNPYLTLAKKYNYFVIFLKMK-AQGVD--HHVQYNTHQVPRDTIAKMILSYGSNPLPYYFNWAVPNSEGVRLRNVTQRLIQSCMKADS---HFSNFLTNEMKTSSQNLFKTFHLQNASSHHYHATVAYTNQYNVPTKISDKYTKSATVKNALGSVTFLQIAGVYITPKCIAARLLLTEEQKKLWGRN-------DSLNRG 428
            +FI+RG+PGSGKSTLA+ +   Y  RD   + SAD Y+        FS +  YK   +       YC ++ I ++++D+TN   +       +A +Y Y V+ ++ K A  +D     + N  Q+  D + K+      + LP YF W +       LR   Q  ++      +       F+  +      +L   F  +       H T  + +    P   +++Y +   +K +      L I+ +++TPK   AR+ L+E+Q +LW  +       D+L RG
Sbjct:   52 LFILRGLPGSGKSTLARVIVDKY--RDGTKMVSADAYKITPGARGAFSEE--YK---RLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGV--LHCTTKFCDYGKAPG--AEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARVELSEQQLQLWPSDVDKLSPTDNLPRG 326
The following BLAST results are available for this feature:
BLAST of TCONS_00056767-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CN372.686e-1925.522',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Ho... [more]
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