TCONS_00057450-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057450-protein
Unique Name	TCONS_00057450-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	691

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057450-protein ID=TCONS_00057450-protein|Name=TCONS_00057450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=691bp
MAARNLAFNDRIEENAVQVFLGESVLAKANVNRLNIMGSRNSGARGTLFV
TNFKVAFTSNCGGGYDFKKPSSLDKLLSEEVDDKDDIIPLTVIEHLFAIS
TSKQKRKKIKDASKELSSNYDIIEIVTKDFRIIQYDFKLTSEESRKPLIK
MLSHYSFPTALSRLFAFDYGKKAWQPNTNLTERAFCTYSHAKDYELDLNR
LGASEQWRVSKVNVEYRLCKSLPQYNVCPASLDDESIIVAASKYPNNRFP
VWLWSDSSTGAALLLSSQLKNDTSLTMHEHPVTITESIRNKGHTTGETIS
IDIGSPCPTLKQLKSSFKKLKRECIFRSSKDFWESDSSWLGDIEQTGWLS
HVSSCLELVHDIIKKINEKQTSVIVCDPDGRHFAILITSLVQILLDPYYR
SLMGLQALIQKDWVMKGFPFCQRLHHISESSKSTIGSQIRTASFKGKDER
RDKDLTYEGESPVFVLFLECLHQLIRQHPLEFEYTEQFLVLLYDASYSCL
FGTFLFNSSYELDESQKESNLMTVWDFIATNIPQSKYISVFTNASYKLDL
EQDIDLTDGGLTSNMQRKMSLHLEHRNSVITDIVSAIPRLLIWNSLFFRW
LPCTDFHKGCSREVVLQLQQIQYMDEIYYLKDRLNQLQQQMQPRDFLSPE
PDSSTRNKKRHKRNASRFSNNEEVRDDFLIIMTGFHFLKML

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036207	XLOC_036207	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057450	TCONS_00057450	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010569	Myotubularin-like_Pase_dom
IPR011993	PH_dom-like
IPR029021	Prot-tyrosine_phosphatase-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010569	Myotubularin-like phosphatase domain	PFAM	PF06602	Myotub-related	coord: 165..275 e-value: 4.4E-14 score: 52.1 coord: 309..511 e-value: 4.4E-54 score: 183.7
IPR010569	Myotubularin-like phosphatase domain	PROSITE	PS51339	PPASE_MYOTUBULARIN	coord: 188..597 score: 62.634
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 27..156 e-value: 5.2E-12 score: 45.2
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 28..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 641..667
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 186..550 coord: 578..602

Blast

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BLAST of TCONS_00057450-protein vs. Swiss-Prot (Human)
Match: MTMRA (Myotubularin-related protein 10 OS=Homo sapiens GN=MTMR10 PE=1 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 5.592e-69
Identity = 156/516 (30.23%), Postives = 261/516 (50.58%), Query Frame = 0

Query:   22 GESVLAKANVNRLNIM-GSRNSGARGTLFVTNFKVAFTSNCGGGYDFKKPSSLDKLLSEEVDDKDDIIPLTVIEHLFAISTSKQKRKKIKDASKELSSNYDIIEIVTKDFRIIQYDFKLTSEESRKPLIKMLSHYSFPTALSRLFAFDYGKKAWQPNTNLTERA-------------------------FCTYSHAKDYELDLNRLGASEQWRVSKVNVEYRLCKSLPQYNVCPASLDDESIIVAASKYPNNRFPVWLWSDSSTGAALLLSSQLKNDTSLTMHEHPVTITESIRNKGHTTGETISIDIGSPCPTLKQLKSSFKKLKRECIFRSSKDFWESDSSWLGDIEQTGWLSHVSSCLELVHDIIKKINEKQTSVIVCDPDGRHFAILITSLVQILLDPYYRSLMGLQALIQKDWVMKGFPFCQRLHHISESSKSTIGSQIRTASFKGKDERRDKDLTYEGESPVFVLFLECLHQLIRQHPLEFEYTEQFLVLLYDASYSCLFGTFLFNSSYE 511
            GE V+ + N  R  I   +      G L  +NFK++F ++         P  L K     +   +  +PLT IE +  ++  K+K +K+   +++L  N   + I  KDFRI+++ F  +  ES K +   ++HYS PT L  LFAF+Y  K +  + N                              F TYS   D++ ++ R GAS  WRV  +N  Y +   LP+Y V P+SL D+ + + +  +   R P+W WS S+ G+AL+  + +K+   L   +    I  +I        +    D+    P +++++++F KLK+ C+   ++ F E++  WL  +E T WL +V + L+   +++  +  K  SV++ + +GR  +  + SLVQ++LDPY+R++ G Q+LIQK+WVM G+ F  R +H+  S K                           ESP+F+LFL+   QL+ Q+P  FE++E +L +LYD++   LFGTFLFNS ++
Sbjct:   41 GEIVVNEVNFVRKCIATDTSQYDLWGKLICSNFKISFITD--------DPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRK-QKVLGPNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSANKINGIPSGDGGGGGGGGNGAGGGSSQKTPLFETYS---DWDREIKRTGAS-GWRVCSINEGYMISTCLPEYIVVPSSLADQDLKIFSHSFVGRRMPLWCWSHSN-GSALVRMALIKD--VLQQRKIDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEVQAAFVKLKQLCV---NEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKHLSVVLQEEEGRDLSCCVASLVQVMLDPYFRTITGFQSLIQKEWVMAGYQFLDRCNHLKRSEK---------------------------ESPLFLLFLDATWQLLEQYPAAFEFSETYLAVLYDSTRISLFGTFLFNSPHQ 510

The following BLAST results are available for this feature:

BLAST of TCONS_00057450-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MTMRA	5.592e-69	30.23	Myotubularin-related protein 10 OS=Homo sapiens GN...	[more]

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TCONS_00057450-protein (polypeptide) - C. hemisphaerica