TCONS_00057683-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057683-protein
Unique NameTCONS_00057683-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length556

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057683-protein ID=TCONS_00057683-protein|Name=TCONS_00057683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=556bp
MLKKKTSWSLTALVILNILCGHLKAKRQCGNITCISLNGFCIGNSKCECN
YGWFGPTCEKPCQCNGLSPCDKDSGKCLQCVNHSEGENCQRCKPGYIGSP
QHNQQCISCQEFCHGKSNICVTSNSYNFWKGIIENDNLRPYQVIKLLSDA
MALNPSIPNEASCLYCKDGRYGHRCQLSCGKGYYRTKDKGCKRCSCNEHA
TQCDQGTGQGCRCLHNTLTKGTYQCLDHRTCLLLQCSYCRNGYIGSPTNG
KQCYKKTNENFLYEDNLHLGNIKSYVLSYDQDQGIRLNVDVIEGAVDIYL
TDNKHVFRATLNENGTQNLFYNDNEKPTPEYTTDEDISAVLLGNQLITFK
RYQKGVLAMKNMQHRAIITIDPQDEHLRRVQFYVVIKKSDDSRPIAKTTL
YYDQGILALDMKLLFVGLLMSALTLVVELTLVFRLRSEYMNNLNNELNNT
HLKELENRPMLQYIFDAPPLSFQHERRDLRVLPVAVQQTAFDDDVAFFSV
LVQLPGYQNSKCDITFGTGIFLLKSETKDSKRIETIKRTTTEEYDLEHIN
YGHNIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036374XLOC_036374Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057683TCONS_00057683Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002049Laminin_EGF
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR009030Growth_fac_rcpt_
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002049Laminin EGF domainSMARTSM00180lamegf_3coord: 62..106
e-value: 2.3E-7
score: 40.5
IPR002049Laminin EGF domainPFAMPF00053Laminin_EGFcoord: 62..106
e-value: 2.7E-6
score: 27.3
IPR002049Laminin EGF domainPROSITEPS01248EGF_LAM_1coord: 77..109
IPR002049Laminin EGF domainPROSITEPS50027EGF_LAM_2coord: 62..108
score: 14.349
IPR002049Laminin EGF domainPROSITEPS50027EGF_LAM_2coord: 194..255
score: 7.799
IPR000742EGF-like domainSMARTSM00181egf_5coord: 61..107
e-value: 29.0
score: 10.7
coord: 108..176
e-value: 110.0
score: 4.3
coord: 212..254
e-value: 130.0
score: 3.4
coord: 28..59
e-value: 26.0
score: 11.3
NoneNo IPR availableGENE3D2.10.25.10coord: 112..193
e-value: 3.5E-6
score: 26.6
NoneNo IPR availableGENE3D2.10.25.10coord: 60..109
e-value: 8.5E-8
score: 31.9
NoneNo IPR availableGENE3D2.10.25.10coord: 194..255
e-value: 1.1E-4
score: 21.9
NoneNo IPR availableCDDcd00055EGF_Lamcoord: 193..254
e-value: 7.87305E-5
score: 39.645
NoneNo IPR availableCDDcd00055EGF_Lamcoord: 61..106
e-value: 1.5347E-7
score: 47.7342
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 62..110
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 47..58
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 159..255

Blast
[Close]
BLAST of TCONS_00057683-protein vs. Swiss-Prot (Human)
Match: MEGF8 (Multiple epidermal growth factor-like domains protein 8 OS=Homo sapiens GN=MEGF8 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 3.026e-42
Identity = 96/292 (32.88%), Postives = 147/292 (50.34%), Query Frame = 0 
Query:   37 LNGFCIGNSKCECNYGWFGPTCEKPCQCNGLSPCDKDSGK--CLQCVNHSEGENCQRCKPGYIGSPQHNQQCISCQEFCHGKSNICVTSNSYNFWKGIIENDNLRPYQVIKLLSDAMALNPSIPNEASCLYCKDGRYGHRCQLSCGKGYYRTKDKGCKRCSCNEHATQCDQGTGQGCRCLHNTLTKGTYQC---LDHRTCLLLQCSYCRNGYIGSPTNGKQCYK------------KTNENFLYEDNLH-LGNIKSYVLSYD---QDQGIRLNVDVIEGAVDIYLTDNKHVF 307
            +NG C+    C C++G+ G  C   C+CN  S C     +  CL C NH++G +C++C P ++GS      C  C  FC G S+IC++       KG  +  +L P ++   +++     PS  +EA C+ C++  YG +C+ SC +GY+   D  C +C CN HA  C++  G GC C +NT T GT Q     D R C   QC+ CR  + GSP  G+QCY+             +  N  +E     LG  ++ +        +  IRL +DV  GAVD+Y++ +   F
Sbjct: 2228 VNGSCVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEG----PS-EDEAVCVNCQNNSYGEKCE-SCLQGYFLL-DGKCTKCQCNGHADTCNEQDGTGCPCQNNTET-GTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEPKRRALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTF 2511
The following BLAST results are available for this feature:
BLAST of TCONS_00057683-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEGF83.026e-4232.88Multiple epidermal growth factor-like domains prot... [more]
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