TCONS_00057734-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057734-protein
Unique NameTCONS_00057734-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057734-protein ID=TCONS_00057734-protein|Name=TCONS_00057734-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
ETEENEFPQTLSLIVKKEIVVCDRVSSIPMVKIECNDGTESNEKAPGLKY
GEQSKTDAFKKFKCSKCFISLKRKRDLIKHRQMVHGRIKLFKCKECGKCF
TLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHIT
TKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTGSDSPCMDYL
PDHTHENLKAFICKTFKSKKKLKKHVDRVHKKIRPHMCDECGKGFTMQYE
VKKHQDAVHKGIKPFECQECGERFTYNKYLQRHSMKHKGIKPFKCDQCSA
KFITKYSLTSHINIVHKKLKPFHCTQCSMKFSMSAGLKRHINAIHKNLKP
FKCDVCDKDFSRKDHLQLHQDTVHKGLKKYSCDQCGVSYGHKSYLKQHID
FVHKKLKPLKCHECDTKYSRKRDLDAHINTVHKKIKSFKFEICGDRFSQS
SCLYRHQQIHEGTKFSCNVCGNSFSRKDSLKKHMETCE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036399XLOC_036399Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057734TCONS_00057734Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 351..374
e-value: 0.0014
score: 27.9
coord: 293..316
e-value: 0.0083
score: 25.3
coord: 380..403
e-value: 0.028
score: 23.6
coord: 167..189
e-value: 0.011
score: 25.0
coord: 91..114
e-value: 0.02
score: 24.0
coord: 465..485
e-value: 6.1
score: 15.2
coord: 211..230
e-value: 75.0
score: 5.5
coord: 236..259
e-value: 0.12
score: 21.5
coord: 409..432
e-value: 0.065
score: 22.4
coord: 322..345
e-value: 0.023
score: 23.8
coord: 265..287
e-value: 0.016
score: 24.3
coord: 438..460
e-value: 29.0
score: 9.2
coord: 62..85
e-value: 0.25
score: 20.4
coord: 120..143
e-value: 0.0012
score: 28.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 267..287
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 93..114
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 169..189
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 324..345
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 382..403
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 411..432
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 238..259
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 122..143
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 295..316
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 353..374
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 293..321
score: 11.926
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 438..465
score: 10.803
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 465..488
score: 10.492
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 120..148
score: 12.799
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 62..90
score: 9.037
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 380..408
score: 12.508
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 167..194
score: 14.233
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 322..350
score: 12.404
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 91..119
score: 13.152
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 409..437
score: 9.494
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 236..264
score: 13.609
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 351..379
score: 13.152
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 265..292
score: 13.942
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 436..485
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 89..145
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 163..191
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 331..388
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 259..311
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 60..110
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 215..274
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 378..429
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 120..143
e-value: 6.0E-4
score: 20.0
coord: 236..259
e-value: 0.0093
score: 16.3
coord: 351..374
e-value: 4.9E-5
score: 23.5
coord: 167..189
e-value: 0.014
score: 15.7
coord: 293..316
e-value: 4.8E-4
score: 20.3
coord: 465..485
e-value: 6.5E-5
score: 23.1
coord: 322..345
e-value: 0.019
score: 15.3
coord: 265..287
e-value: 0.003
score: 17.8
coord: 410..432
e-value: 0.0013
score: 18.9
coord: 91..114
e-value: 0.0024
score: 18.1
NoneNo IPR availableGENE3D3.30.160.60coord: 472..486
e-value: 1.1E-4
score: 22.0
NoneNo IPR availableGENE3D3.30.160.60coord: 212..243
e-value: 1.9E-8
score: 33.7
NoneNo IPR availableGENE3D3.30.160.60coord: 279..305
e-value: 2.3E-16
score: 59.4
NoneNo IPR availableGENE3D3.30.160.60coord: 258..278
e-value: 2.9E-8
score: 33.0
NoneNo IPR availableGENE3D3.30.160.60coord: 152..178
e-value: 3.2E-8
score: 33.0
NoneNo IPR availableGENE3D2.30.30.380coord: 419..448
e-value: 9.4E-5
score: 22.0
NoneNo IPR availableGENE3D2.20.28.10coord: 332..354
e-value: 6.7E-8
score: 31.8
NoneNo IPR availableGENE3D3.30.160.60coord: 379..392
e-value: 7.3E-6
score: 25.6
NoneNo IPR availableGENE3D2.20.28.30coord: 449..471
e-value: 1.6E-13
score: 50.2
NoneNo IPR availableGENE3D3.30.160.60coord: 32..72
e-value: 0.058
score: 13.3
coord: 102..128
e-value: 1.7E-13
score: 50.2
coord: 393..418
e-value: 2.5E-11
score: 43.2
coord: 73..101
e-value: 1.5E-9
score: 37.6
NoneNo IPR availableGENE3D3.30.160.60coord: 179..211
e-value: 1.1E-7
score: 31.2
coord: 129..151
e-value: 1.7E-4
score: 21.0
NoneNo IPR availableGENE3D3.30.160.60coord: 244..257
e-value: 0.0033
score: 17.1
NoneNo IPR availableGENE3D2.20.28.30coord: 306..331
e-value: 7.7E-8
score: 31.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 355..378
e-value: 1.4E-12
score: 46.9

Blast
BLAST of TCONS_00057734-protein vs. Swiss-Prot (Human)
Match: ZN160 (Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3)

HSP 1 Score: 248.44 bits (633), Expect = 9.154e-74
Identity = 156/429 (36.36%), Postives = 219/429 (51.05%), Query Frame = 0
Query:   60 KKFKCSKCFISLKRKRDLIKHRQMVHGRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTGSDSPCMDYLPDHTHENLKAFIC----KTFKSKKKLKKHVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKPFECQECGERFTYNKYLQRHSMKHKGIKPFKCDQCSAKFITKYSLTSHINIVHKKLKPFHCTQCSMKFSMSAGLKRHINAIHKNLKPFKCDVCDKDFSRKDHLQLHQDTVHKGLKKYSCDQCGVSYGHKSYLKQHIDFVHKKLKPLKCHECDTKYSRKRDLDAHINTVHKKIKSFKFEICGDRFSQSSCLYRHQQIHEGTK-FSCNVCGNSFSRKDSLKKH 483
            K +KC++C  +  +  +L  HR+ +H   K +KC ECGK FT+R  L +H+  +H  +K ++C ECG+ F H +YL  H+R   G                    K ++C +CGK+F    +L  HQLIHTG                 K F C    K F     L  H  R+H   +P+ C+ECGK F+++  +  HQ  +H G KP++C ECG+ F YN YL RH   H G KP+KC++C   F    +L +H  ++H   KPF C +CS  F+ ++ L  H   IH   KP+KC+ C K FS +  L  HQ  +H G K Y C +CG S+  KS+L+ H   +H   KP KC+EC   +++   L  H   VH   K +K   CG  FS  S L  HQ IH G K + C+ CG  F     L  H
Sbjct:  255 KPYKCNECGKAFTQNSNLTSHRR-IHSGEKPYKCSECGKTFTVRSNLTIHQ-VIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGE-------------------KPYKCNECGKAFRGHSNLTTHQLIHTGE----------------KPFKCNECGKLFTQNSHLISHW-RIHTGEKPYKCNECGKAFSVRSSLAIHQ-TIHTGEKPYKCNECGKVFRYNSYLGRHRRVHTGEKPYKCNECGKAFSMHSNLATH-QVIHTGTKPFKCNECSKVFTQNSQLANH-RRIHTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSHRG-IHSGEKPYKCNECGKVFAQTSQLARHWR-VHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATH 639          

HSP 2 Score: 229.565 bits (584), Expect = 8.988e-67
Identity = 150/444 (33.78%), Postives = 222/444 (50.00%), Query Frame = 0
Query:   60 KKFKCSKCFISLKRKRDLIKHRQMVHGRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTGS--------------DSPCMDYLPDHTHENLKAFIC----KTFKSKKKLKKHVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKPFECQECGERFTYNKYLQRHSMKHKGIKPFKCDQCSAKFITKYSLTSHINIVHKKLKPFHCTQCSMKFSMSAGLKRHINAIHKNLKPFKCDVCDKDFSRKDHLQLHQDTVHKGLKKYSCDQCGVSYGHKSYLKQHIDFVHKKLKPLKCHECDTKYSRKRDLDAHINTVHKKIKSFKFEICGDRFSQSSCLYRHQQIHEGTK-FSCNVCGNSFSRKDSLKKHM 484
            K FKC++C     +   LI H + +H   K +KC ECGK F++R  L +H+  +H  +K ++C ECG+ F + +YL  H+R   G                    K ++C +CGK+F+   +L  HQ+IHTG+              +S   ++   HT E  K + C    K F  +  L  H   +H   +P+ C ECGK FT +  ++ H+  +H G KP++C ECG+ F     L RH   H G KP+KC+ C   F  + SLT H   +H   KP+ C +C   F  ++ L  H   IH   KP+KC+ C K FS   +L  H+  +H G K Y C+QCG  +   S+L  H    H   KP +C+EC   +S +  L  H   +H   K +K   CG  F+Q++ L  H++IH G K + C  CG +F  + SL  HM
Sbjct:  367 KPFKCNECGKLFTQNSHLISHWR-IHTGEKPYKCNECGKAFSVRSSLAIHQT-IHTGEKPYKCNECGKVFRYNSYLGRHRRVHTGE-------------------KPYKCNECGKAFSMHSNLATHQVIHTGTKPFKCNECSKVFTQNSQLANHRRIHTGE--KPYKCNECGKAFSVRSSLTTH-QAIHSGEKPYKCIECGKSFTQKSHLRSHR-GIHSGEKPYKCNECGKVFAQTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFH-QAIHTGEKPYKCHECGKVFRHNSYLATH-RRIHTGEKPYKCNECGKAFSMHSNLTTHK-VIHTGEKPYKCNQCGKVFTQNSHLANH-QRTHTGEKPYRCNECGKAFSVRSSLTTH-QAIHTGKKPYKCNECGKVFTQNAHLANHRRIHTGEKPYRCTECGKAFRVRSSLTTHM 780          

HSP 3 Score: 152.91 bits (385), Expect = 8.988e-40
Identity = 97/297 (32.66%), Postives = 148/297 (49.83%), Query Frame = 0
Query:   60 KKFKCSKCFISLKRKRDLIKHRQMVHGRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTGSDSPCMDYLPDHTHENLKAFIC----KTFKSKKKLKKHVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKPFECQECGERFTYNKYLQRHSMKHKGIKPFKCDQCSAKFITKYSLTSHINIVHKKLKPFHCTQCSMKFSMSAGLKRHINAIHKNLKPFK 352
            K +KC++C     +   L +H + VH   K +KC +CG+ F+ R  L  H+  +H  +K ++C ECG+ F H +YL  H+R   G                    K ++C +CGK+F+   +L  H++IHTG                 K + C    K F     L  H  R H   +P+ C+ECGK F+++  +  HQ A+H G KP++C ECG+ FT N +L  H   H G KP++C +C   F  + SLT+H+ I H   K + C +C   F  S+ L  H + +H   KP+K
Sbjct:  563 KPYKCNECGKVFAQTSQLARHWR-VHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGE-------------------KPYKCNECGKAFSMHSNLTTHKVIHTGE----------------KPYKCNQCGKVFTQNSHLANH-QRTHTGEKPYRCNECGKAFSVRSSLTTHQ-AIHTGKKPYKCNECGKVFTQNAHLANHRRIHTGEKPYRCTECGKAFRVRSSLTTHMAI-HTGEKRYKCNECGKVFRQSSNLASH-HRMHTGEKPYK 818          
The following BLAST results are available for this feature:
BLAST of TCONS_00057734-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1609.154e-7436.36Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 ... [more]
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