TCONS_00057738-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057738-protein
Unique NameTCONS_00057738-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length348

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057738-protein ID=TCONS_00057738-protein|Name=TCONS_00057738-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp
MKESILVSGYALNCVVACEGMPKKVSGAKIAFLDFSLMKAKMNLGVLVQI
EDPAKLDAVRQREADITKERIQKVLSSGANVILLSGGVDDLCMKYFVEAG
AMAVRRVKKADLKRIARATGGTVCLSLANLEGEESFDTSLLGHSEEVVQE
RICDDELILIKNPKTRPAASIILRGANDYMCDEMERSIHDALCVVKRVME
SKSIVPGGGCVEAALSIYLENFATSLASREQLAIAEFANSLLVIPKTLTV
NAAKDSADLVAKLRAYHNASQVQPEKANLKWVGLDLINGTIRDNKKAGVL
EPAMSKIKCLKFATEAAITILRIDDMVKLEPDKKDDNTYQAARAAGRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036401XLOC_036401Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057738TCONS_00057738Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial
IPR002423Cpn60/TCP-1
IPR027409GroEL-like_apical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 170..192
score: 34.6
coord: 204..216
score: 47.0
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 166..323
e-value: 1.8E-37
score: 128.3
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 2..329
e-value: 7.7E-89
score: 298.5
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 1..165
e-value: 1.2E-43
score: 148.7
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 3..175
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 168..202
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 202..329

Blast
[Close]
BLAST of TCONS_00057738-protein vs. Swiss-Prot (Human)
Match: TCPA (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 254/346 (73.41%), Postives = 298/346 (86.13%), Query Frame = 0 
Query:    3 ESILVSGYALNCVVACEGMPKKVSGAKIAFLDFSLMKAKMNLGVLVQIEDPAKLDAVRQREADITKERIQKVLSSGANVILLSGGVDDLCMKYFVEAGAMAVRRVKKADLKRIARATGGTVCLSLANLEGEESFDTSLLGHSEEVVQERICDDELILIKNPKTRPAASIILRGANDYMCDEMERSIHDALCVVKRVMESKSIVPGGGCVEAALSIYLENFATSLASREQLAIAEFANSLLVIPKTLTVNAAKDSADLVAKLRAYHNASQVQPEKANLKWVGLDLINGTIRDNKKAGVLEPAMSKIKCLKFATEAAITILRIDDMVKLEPDKKDD--NTYQAARAAG 346
            ES+L+SGYALNCVV  +GMPK++  AKIA LDFSL K KM LGV V I DP KLD +RQRE+DITKERIQK+L++GANVIL +GG+DD+C+KYFVEAGAMAVRRV K DLKRIA+A+G T+  +LANLEGEE+F+ ++LG +EEVVQERICDDELILIKN K R +ASIILRGAND+MCDEMERS+HDALCVVKRV+ESKS+VPGGG VEAALSIYLEN+ATS+ SREQLAIAEFA SLLVIP TL VNAA+DS DLVAKLRA+HN +QV PE+ NLKW+GLDL NG  RDNK+AGV EP + K+K LKFATEAAITILRIDD++KL P+ KDD   +Y+ A  +G
Sbjct:  207 ESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSYEDAVHSG 552
The following BLAST results are available for this feature:
BLAST of TCONS_00057738-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPA0.000e+073.41T-complex protein 1 subunit alpha OS=Homo sapiens ... [more]
back to top