TCONS_00057747-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057747-protein
Unique NameTCONS_00057747-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length220

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057747-protein ID=TCONS_00057747-protein|Name=TCONS_00057747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
IRVCVLFNSLFTSDLIFKMASEAQVVHEDSTWFSFLGKLHGSLFDLIENF
SKSLDGNSNATPRHSSKNVKLQSNYVPDSFTAEIDDYWEFLKVLPWRENW
MLCLMMFHLTCLLLITISRKSANLQYCIFFLLLCCVYFSERLNELAADNH
KRFASENFFDSSGLFISTVFSIPVLFNCIVLIVMWLSSAARTLIDVKQRQ
IRQQQQRQQNSDDKETKKDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036405XLOC_036405Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057747TCONS_00057747Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026721TMEM18
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 88..205
e-value: 1.9E-39
score: 134.2

Blast
[Close]
BLAST of TCONS_00057747-protein vs. Swiss-Prot (Human)
Match: TMM18 (Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.283e-22
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:   96 WRENWMLCLMMFHLTCLLLITISRKSANLQYCIFFLLLCCVYFSERLNELAADNHKRFASENFFDSSGLFISTVFSIPVLFNCIVLIVMWLSSAARTLIDVKQRQ 200
            W E W++ L  FH  C+LL  +S +S  LQ   F  L+  VY +E +NE AA N + F+   +FDS G+FIS VFS P+L N ++++VMW+      + D+K  Q
Sbjct:   23 WTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQ 127
The following BLAST results are available for this feature:
BLAST of TCONS_00057747-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMM183.283e-2240.95Transmembrane protein 18 OS=Homo sapiens GN=TMEM18... [more]
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