TCONS_00057792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057792-protein
Unique NameTCONS_00057792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length220

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057792-protein ID=TCONS_00057792-protein|Name=TCONS_00057792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
MTENQESQKDEIEALTSIYGKDFSLLGENTFDLRICCDDIKWWAVTVSVL
LPENYPSEEAPLYEIHTECLAGSELGELQNELDNIWQENIGTNVLYMWTE
KIREYLFERYERAKLFIESPEEDKQRERALTDLMREEDASEQIETQDVPQ
KEEETSTQVMDETVPEIHSSDTITLKKSTFQGHSAVVHTLTDISEVKHTR
IITTTDEKCIRLVKIRNLIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036422XLOC_036422Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057792TCONS_00057792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006575RWD-domain
IPR016135UBQ-conjugating_enzyme/RWD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006575RWD domainSMARTSM00591RWD2001bcoord: 10..109
e-value: 4.2E-18
score: 76.2
IPR006575RWD domainPFAMPF05773RWDcoord: 6..105
e-value: 5.8E-17
score: 61.9
IPR006575RWD domainPROSITEPS50908RWDcoord: 10..109
score: 21.267
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..116
e-value: 5.6E-23
score: 80.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..161

Blast
[Close]
BLAST of TCONS_00057792-protein vs. Swiss-Prot (Human)
Match: IMPCT (Protein IMPACT OS=Homo sapiens GN=IMPACT PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.570e-19
Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 0 
Query:    6 ESQKDEIEALTSIYGKDFSLLGE--NTFDLRIC--CDDIKWWAVTVSVLLPENYPSEEAPLYEIHTECLAGSELGELQNELDNIWQENIGTNVLYMWTEKIREYLFERYERAKLFIESPEEDKQRERALTDLMREEDASEQIETQDVPQKEEETSTQVMD------------ETVPEIHSSDTITLKKSTFQGHSAVV 187
            + Q +EIEA+ +IYG+++ ++ +    F +RI    DD KW  + + V+LP  YP    P+Y+++   L G E  +L N L+ I+ +NIG ++LY+W EKIR+ L ++ +     +  P  D ++        + E+   + E   +   + E+S + +D            E +P I     IT ++STFQ H A V
Sbjct:   10 QRQNEEIEAMAAIYGEEWCVIDDCAKIFCIRISDDIDDPKW-TLCLQVMLPNEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQ-----MTEPGPDVKK--------KTEEEDVECEDDLILACQPESSLKALDFDISETRTEVEVEELPPIDHGIPITDRRSTFQAHLAPV 193
The following BLAST results are available for this feature:
BLAST of TCONS_00057792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMPCT2.570e-1929.80Protein IMPACT OS=Homo sapiens GN=IMPACT PE=1 SV=2[more]
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