TCONS_00057852-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057852-protein
Unique NameTCONS_00057852-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057852-protein ID=TCONS_00057852-protein|Name=TCONS_00057852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
KNKKQLFEYWLQLPWERSILTNENLLKLHKTMSENEDKKITTKNSSPTTK
TTPPPKQLNNPKGPPYSHPVYKKIAAANGRINRMSKSQVVDALEYLKLNP
KGSLEVLQKRLKSHTKKQHFLENDFTEEEKKYTDFYIVIDFEATCEKENP
KGYQHEIIEFPAVLVDADTLEVVSEFHSYCRPLTNPILSKFCRDLTGITQ
LTVESSSTFETVLNRFDKWLKDQVTPDQKFVIVTDGPWDIDRFLKTQCKM
SKMEIPHYFQRWVNVRKHFNNFYKIHQVNVEQMLQCLGTEFVGRQHSGID
DSRNIARIMIELIKDGCQVIINETFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036471XLOC_036471Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057852TCONS_00057852Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..69
NoneNo IPR availableCDDcd06133ERI-1_3'hExo_likecoord: 136..313
e-value: 2.28577E-72
score: 223.251
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 135..318
e-value: 6.4E-21
score: 85.5
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 137..308
e-value: 2.3E-31
score: 109.5
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 85..320
e-value: 4.2E-42
score: 143.4
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 132..318

Blast
[Close]
BLAST of TCONS_00057852-protein vs. Swiss-Prot (Human)
Match: ERI1 (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 3.650e-78
Identity = 119/263 (45.25%), Postives = 174/263 (66.16%), Query Frame = 0 
Query:   66 YSHPVYKKIAAANGRINRMSKSQVVDALEYLKLNPKGSLEVLQKRLKSHTKKQHFL--ENDFTEEEKKYTDFYIVIDFEATCEKENPKGYQHEIIEFPAVLVDADTLEVVSEFHSYCRPLTNPILSKFCRDLTGITQLTVESSSTFETVLNRFDKWLK-DQVTPDQKFVIVTDGPWDIDRFLKTQCKMSKMEIPHYFQRWVNVRKHFNNFYKI--HQVNVEQMLQCLGTEFVGRQHSGIDDSRNIARIMIELIKDGCQVIINE 323
            +S PVYK+IA  NG INRMSK ++   L   KL  +G  +VL+KRLK++ KKQ  +  E++F +    Y D+  +IDFEATCE+ NP  + HEIIEFP VL++  TLE+   F  Y RP  N  LS FC  LTGITQ  V+ + TF  VL +   W+K  ++    K+ ++TDG WD+ +FL  QC++S+++ P + ++W+N+RK + NFYK+   Q  +  ML+ LG ++ GR H G+DDS+NIARI + +++DGC++ INE
Sbjct:   61 FSDPVYKEIAITNGCINRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFADS---YYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINE 320
The following BLAST results are available for this feature:
BLAST of TCONS_00057852-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERI13.650e-7845.253'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE... [more]
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