TCONS_00057853-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057853-protein
Unique Name	TCONS_00057853-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	643

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057853-protein ID=TCONS_00057853-protein|Name=TCONS_00057853-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
RFPRFSDSSSPKLKFQNGAFTFPQTILVEKMAGSQMLFACTKCHSRHKFD
DLSKEEQLCKDCRRKYPLINCTYCQLEFHILKKVKGQAVCGKCAHNLQTY
GEPKKCKYCFVKAAFKEKTCVRCTSSEKKYGKPIQCQGCALNCAFQKTKE
TKAKVNGKILCLKCTLQFKKDRHKTQKQQRKDQQSSLGNPVLAPLKAENI
TKSLYKTGLDSTDHSRHSIIGRAENNNSIEPTFGDHMTELTSLREQIIQL
KRTIGQKEKIILEKDKKISELKSDQWEKEKLLRSKTQTLQKQYDERIENL
QIENSNLKRQVSQLSKVKKTPKADKVSSRIRLEAHKINLTPTSGRSPEHK
ASHTEESNTEAENTEEENTEAENTADEEMPSEEKSEQKEEATDKAKDDKE
KEDDDPKDTSTEFVENVESKEKEEGNDDEGVNEQSKDEEDSFNLGDSKEE
EKETKEERKRPVIDESDSPQPSDDDEEDEKDQEDDEEDDDEDKKTLSPMK
LLQSFDEAQADGIKRLLSEDNEPEDDDEPNEEGEEEPSKPPEEDEPVVAS
DESDREEQPVRHKRKRKSSGSSKKRKRKRTRDKKSKDEDEDEDGEKSSKK
KRKKKHKSKAIISDHEDSSDNDERMTIDEGPTAADGSDSSDAE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036472	XLOC_036472	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057853	TCONS_00057853	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032017	FAM76

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 381..401
None	No IPR available	COILS	Coil	Coil	coord: 354..374
None	No IPR available	COILS	Coil	Coil	coord: 290..317
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..643
IPR032017	FAM76 protein	PFAM	PF16046	FAM76	coord: 37..319 e-value: 2.3E-71 score: 240.5

Blast

[Close]

BLAST of TCONS_00057853-protein vs. Swiss-Prot (Human)
Match: FA76A (Protein FAM76A OS=Homo sapiens GN=FAM76A PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 5.660e-55
Identity = 117/306 (38.24%), Postives = 178/306 (58.17%), Query Frame = 0

Query:   37 LFACTKCHSRHKFDDLSKEEQLCKDCRRKYPLINCTYCQLEFHILKKVKGQAVCGKCAHNLQTYGEPKKCKYCFVKAAFKEKTCVRCTSSEKKYGKPIQCQGCALNCAFQKTKETKAKVNGKILCLKCTLQFKKDRHKTQKQQRKDQQSSLGN-------PVLAPLKAENITKSLYKTGLDSTDHSRHSII-GRAENNNSIEPTFG------DHMTELTSLREQIIQLKRTIGQKEKIILEKDKKISELKSDQWEKEKLLRSKTQTLQKQYDERIENLQIENSNLKRQVSQLSKVKKTPKADKVSS 328
            L+ACTKCH R  F+ LS+ +QLCK+CR  +P++ CTYC+ E+   ++ K   +C KCA N+Q YG PK C+YC + AAF    C RCT+SEKKYG P  C+ C   CAF + K+ + KV+GK+LC  CTL +K+   KT++Q++    SS            L+     N  K+L  + + +    + S       N +S  P         DH   +  L+E++  LK+ + QK+++ILEK+KKI+ELK+D   +E  +R+K   ++K + E  E LQ +N  L +Q + LSK KK+ K+  ++S
Sbjct:    4 LYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQ--QESKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPYSCEQCKQQCAFDR-KDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHLSSSSRAGHQEKEQYSRLSGGGHYNSQKTLSTSSIQNEIPKKKSKFESITTNGDSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITS 306

The following BLAST results are available for this feature:

BLAST of TCONS_00057853-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057853-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FA76A	5.660e-55	38.24	Protein FAM76A OS=Homo sapiens GN=FAM76A PE=2 SV=1	[more]

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TCONS_00057853-protein (polypeptide) - C. hemisphaerica