TCONS_00057877-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057877-protein
Unique NameTCONS_00057877-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length442

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057877-protein ID=TCONS_00057877-protein|Name=TCONS_00057877-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MRRSVICHTNDVSDDSAIESDCNQPADRPSRYSIQSLLASDEPTLNLLEK
RRRNFDSKDSGYEDDDDSQSQTSMLSNRESVGEQIQEQEQAVDSNITELL
RQTQTLMTSLSSATSASSASARDHKNLLDSLSMHGNADGTRLMMPNNLIT
EEQLQNFSFFDPKSDEFKHRFESSVLSALKDPQIQYLLTLYNFIDEGLLR
NTLLKFLNGSSLDGDTLNAAERYLRKEGQMTAGPSSAQLRDTEGAPQNEL
FNFLLQRKARQERTLSTRSSPDFHIVPTNSHTHDPNNNIIKEKLSNLQVR
SSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYL
RHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFS
ISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARHINSFHT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036488XLOC_036488Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057877TCONS_00057877Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 418..441
e-value: 0.0065
score: 25.7
coord: 390..412
e-value: 0.01
score: 25.0
coord: 362..384
e-value: 0.0059
score: 25.8
coord: 306..328
e-value: 0.0066
score: 25.6
coord: 334..356
e-value: 0.025
score: 23.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 364..384
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 308..328
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 392..412
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 336..356
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..441
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 418..442
score: 12.404
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 390..417
score: 15.334
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 362..389
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 334..361
score: 13.235
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 306..333
score: 13.38
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 307..356
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 384..436
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 342..399
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 396..415
e-value: 2.6E-17
score: 62.1
NoneNo IPR availableGENE3D3.30.160.60coord: 416..442
e-value: 3.4E-9
score: 36.2
NoneNo IPR availableGENE3D3.30.160.60coord: 262..321
e-value: 6.8E-6
score: 25.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 418..441
e-value: 2.7E-6
score: 27.4
coord: 362..384
e-value: 0.0013
score: 19.0
coord: 334..356
e-value: 0.013
score: 15.8
coord: 307..328
e-value: 3.1E-5
score: 24.1
coord: 390..412
e-value: 5.0E-4
score: 20.3
NoneNo IPR availableGENE3D3.30.160.60coord: 362..375
e-value: 1.6E-9
score: 37.1
NoneNo IPR availableGENE3D3.30.160.60coord: 376..395
e-value: 4.9E-16
score: 58.4
NoneNo IPR availableGENE3D2.40.155.10coord: 322..361
e-value: 1.8E-18
score: 67.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..288

Blast
BLAST of TCONS_00057877-protein vs. Swiss-Prot (Human)
Match: ZN358 (Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.776e-37
Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 0
Query:  301 SSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARHIN 438
            S      C  C K F +   L++HLRTH G R HKC  C++ F   ++ L+H+R+H GE+ + C QC  AF + SAL  H RTHT ERP+ C +CGK F  S NL  H+ IHTG RPY C  C +AF   S L +H++
Sbjct:  230 SGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQHLH 367          

HSP 2 Score: 127.872 bits (320), Expect = 5.094e-32
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = 0
Query:  296 NLQVRSSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARH 436
            +L+        +C  C K F    +L +HLRTH G R + C +C ++F   ++ L+H R+H  E+ ++C  C  AF + S L+ H R HTGERP+ C +C K F  S  L +H+ +H+G RPY+C  C +AF   S L +H
Sbjct:  253 HLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKH 393          

HSP 3 Score: 124.02 bits (310), Expect = 1.076e-30
Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 0
Query:  299 VRSSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARHINSFHT 442
            + + +   QC  C K F  + +L +H  +H G + H C  C ++F   +   +H+R+H G + HKC  C+  F + SAL  H RTHTGERP+ C  CGK F  S  L +H   HT  RPY+C  C +AF   S+L  H+   HT
Sbjct:  200 IHTGARPYQCAACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLR-IHT 342          

HSP 4 Score: 122.865 bits (307), Expect = 2.609e-30
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 0
Query:  301 SSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARH 436
            S     +C  C K+F++  +L++H   H G R ++CA C ++F  +++ L+H  SH+GEK H C  C  AF   S L  H RTH G RP +C  C KGF     L +H+  HTG RPY C +C +AF   S L +H
Sbjct:  174 SGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPYQCAACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQH 309          

HSP 5 Score: 105.531 bits (262), Expect = 2.481e-24
Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 0
Query:  301 SSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTGHRPYKCGKCPRAFNNPSHLARHINS 439
            S      C  C + F     LS+H RTH G + ++C  C +SF    +  +H   H G + ++C  C  AF  RS L  H  +H+GE+P  C  CGK F     L +H+  H G RP+KC  C + F   S L +H+ +
Sbjct:  146 SPPRPFSCPDCGRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPYQCAACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRT 284          

HSP 6 Score: 100.908 bits (250), Expect = 7.530e-23
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 0
Query:  294 LSNLQVRSSSNEMQCEYCQKTFTNQHSLSRHLRTHEGTRTHKCAKCSRSFYDQTSYLRHVRSHNGEKKHKCDQCSMAFNKRSALEVHFRTHTGERPFECKYCGKGFSISGNLHRHVLIHTG 414
            L +L+  +      C  C K F    +L +H RTH   R ++C  C ++F   ++   H+R H GE+ + C  CS AF + SAL  H   H+GERP+ C+ CGK F  + +L +H  +H G
Sbjct:  279 LKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVHEG 399          
The following BLAST results are available for this feature:
BLAST of TCONS_00057877-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3581.776e-3745.65Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 ... [more]
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