TCONS_00057886-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057886-protein
Unique NameTCONS_00057886-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057886-protein ID=TCONS_00057886-protein|Name=TCONS_00057886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
IKYRSIYYYVLFFPSLKMKKNNKEGNYEKKDNQVMNKKRESGSLDESSPL
YTQFLLYQRELDTRNDKRERLVKLSRDVTIQSKRTIFTLLRKEFNKEKIL
LEGKSKIAEIKLLLDRINLELVNEDIHRFQRAFSPGIQEYVEAVSLYHYI
DTGSVISYEETQQTFFDVENFSYFLTQMDYMLGIADLTGEMMRMSINAIG
SGHFEIVESTCSTLQEIYSNFSIFSNSNRDLSRKLSVMKNSLQKVEKARC
NLKVRGSEIPKHLLSMLLDETDEKIHTEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036496XLOC_036496Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057886TCONS_00057886Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016068Translin_N
IPR002848Translin_fam
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043565 sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availableCOILSCoilCoilcoord: 20..40
NoneNo IPR availableGENE3D1.20.58.200coord: 177..274
e-value: 7.3E-28
score: 96.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..46
NoneNo IPR availableCDDcd14820TRAXcoord: 54..251
e-value: 4.63109E-60
score: 190.083
IPR016068Translin, N-terminalGENE3D1.20.58.190coord: 43..176
e-value: 7.6E-37
score: 126.4
IPR002848Translin familyPFAMPF01997Translincoord: 66..256
e-value: 3.6E-55
score: 187.0
IPR002848Translin familySUPERFAMILY74784Translincoord: 50..258

Blast
[Close]
BLAST of TCONS_00057886-protein vs. Swiss-Prot (Human)
Match: TSNAX (Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.900e-63
Identity = 121/286 (42.31%), Postives = 172/286 (60.14%), Query Frame = 0 
Query:   21 NNKEGNY----EKKDNQVMNKKRESGSLDESSPLYTQFLLYQRELDTRNDKRERLVKLSRDVTIQSKRTIFTLLR--KEFNKEKILLEGKSKIAEIKLLLDRINLELVNEDIHRFQRAFSPGIQEYVEAVSLYHYIDTGSVISYEE-TQQTFFDVEN----------------FSYF---LTQMDYMLGIADLTGEMMRMSINAIGSGHFEIVESTCSTLQEIYSNFSIFSNSNR-DLSRKLSVMKNSLQKVEKARCNLKVRGSEIPKHLLSMLLDETDEKIHTEE 279
            +NKEG+      K DN   N++RE   ++ SSP+   F  +Q+ELD R+DK ERLVKLSRD+T++SKRTIF L R     + E IL E + K+  ++  + ++  EL  ED+H+F RA + G+QEYVEAVS  H+I T S+IS +E  +Q  F  E+                F  +   +T +DY+LG+ADLTGE+MRM IN++G+G  +        L+++Y  FS   N+   ++S+KL  +K SL KVE A   LKVRGSEIPKH+L+ +     E I  EE
Sbjct:    2 SNKEGSGGFRKRKHDNFPHNQRREGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEE 287
The following BLAST results are available for this feature:
BLAST of TCONS_00057886-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSNAX1.900e-6342.31Translin-associated protein X OS=Homo sapiens GN=T... [more]
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