TCONS_00057898-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057898-protein
Unique NameTCONS_00057898-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057898-protein ID=TCONS_00057898-protein|Name=TCONS_00057898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MSSWLPIPFRVVILGGGLSGLAAAHTVLKHAQVPTQVTVIESQNRFGGWL
ESTRFNDGTVFEHGPRSGRSYGNVALDALSLLSDIGIDDKFIGVPKSNDA
ASRRYIYYNGQILELPRGLALAKKWGPLPKSLLGLMIREPFVKKSDLDDM
SVHEFFRRRFNCEEIADYLADPLCHGIFGWDSKQLSLRSCFPMLFDYEKN
YGSVVKGALLSKGNKPPISSLSNKAKEQQWMAWSVKGGMQTLPELWSQHL
IEKGLQCHLNTECKKLKVEFTTDSRKFHIETNNGTFEADXNFFGWLFHAS
FNFSLKPFMETAATTSDGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036506XLOC_036506Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057898TCONS_00057898Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004572Protoporphyrinogen_oxidase
IPR002937Amino_oxidase
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006779porphyrin-containing compound biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004729oxygen-dependent protoporphyrinogen oxidase activity
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006779 porphyrin-containing compound biosynthetic process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004572Protoporphyrinogen oxidaseTIGRFAMTIGR00562TIGR00562coord: 10..284
e-value: 7.8E-42
score: 141.4
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 18..289
e-value: 1.1E-23
score: 84.1
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 4..80
e-value: 1.8E-4
score: 20.8
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 9..289
NoneNo IPR availableGENE3D1.10.3110.10coord: 115..212
e-value: 1.3E-22
score: 79.5

Blast
[Close]
BLAST of TCONS_00057898-protein vs. Swiss-Prot (Human)
Match: PPOX (Protoporphyrinogen oxidase OS=Homo sapiens GN=PPOX PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.335e-50
Identity = 100/281 (35.59%), Postives = 154/281 (54.80%), Query Frame = 0 
Query:   11 VVILGGGLSGLAAAHTVLKHAQVPTQVTVIESQNRFGGWLESTRFNDGTVFEHGPRSGRSYGNVALDALSLLSDIGIDDKFIGVPKSNDAASRRYIYYNGQILELPRGL-ALAKKWGPLPKSLLGLMIREPFVKKSDLDDMSVHEFFRRRFNCEEIADYLADPLCHGIFGWDSKQLSLRSCFPMLFDYEKNYGSVVKGALLSKGNKP-PISSLSNKAKEQQWMAWSVKGGMQTLPELWSQHLIEKGLQCHLNTECKKLKVEFTTDSRKFHIETNNGTFEAD 289
            VV+LGGG+SGLAA++  L  A  P +V ++ES  R GGW+ S R  +G +FE GPR  R  G +    L L+S++G+D + + V   + AA  R++Y  G +  LP GL  L +   P  K L    +RE    +    D +VH F +RR    E+A    D LC G+F  +S++LS+RSCFP LF  E+ + S++ G LL  G  P P S+L  +A  ++W  WS++GG++ LP+    HL  +G+          L ++      ++ +   + + EAD
Sbjct:    5 VVVLGGGISGLAASYH-LSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLG-PEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG---RWKVSLRDSSLEAD 280
The following BLAST results are available for this feature:
BLAST of TCONS_00057898-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPOX3.335e-5035.59Protoporphyrinogen oxidase OS=Homo sapiens GN=PPOX... [more]
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