TCONS_00057916-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057916-protein
Unique NameTCONS_00057916-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length664

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057916-protein ID=TCONS_00057916-protein|Name=TCONS_00057916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=664bp
PRARGQAKSEMDASVVTPMITETSTNDEVYNFIQLQHTSNEASQPSEMES
TVQTETMEHDSQVIEPRKEIGTTAVDQTNQFDQNITHMTQTFEPVNLYVC
DKCNRTFKQKSRYERHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTE
ERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQH
QHVHTGLRPYGCEHENCGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFR
TKSACRKHYLRHFKDGASYKCGVCEEMFKDEREYKMHLETHDEKQRTGAH
RCGFCLRVFKSQEDLNAHVPLHESGLQYTCERCSARFFTQVDFLKHTAKH
FEESTLAVEQNIQEQHHVSTATNAQPKENEVPQQKDALPNPQNTLQEGNE
NVNKLLVVLQLPQSASNLRNEQGALQVDSIQQLLGTVRIDKLVVTTDPIS
NSSQAVALQLSQSQQQSIQQILQTTHIRRQNPPISTLESLNKAPLNALET
LTSTLNEAATFPDLTSHDTMDAPDLSQHVQSSFVLKSLSHQPPPPPESKS
VSQYLIVPPTGPGFTPIVNSKIKIIHKPPEPIGNNSVFTRPPPNLLQNNE
LVPTHPLELIVNDEDVPETGVKQGDSFEPNTTSLTMGSLHQTPENSNTEE
KVRNSSSSNYFQHX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036520XLOC_036520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057916TCONS_00057916Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 182..204
e-value: 3.2E-4
score: 30.0
coord: 126..148
e-value: 0.013
score: 24.7
coord: 300..322
e-value: 0.38
score: 19.8
coord: 98..120
e-value: 7.8E-4
score: 28.7
coord: 269..291
e-value: 0.0098
score: 25.1
coord: 328..350
e-value: 0.13
score: 21.3
coord: 240..262
e-value: 0.0047
score: 26.1
coord: 210..234
e-value: 0.0023
score: 27.2
coord: 154..176
e-value: 0.085
score: 22.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 128..148
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 271..291
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 100..120
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 302..322
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 212..234
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 184..204
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 330..350
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 156..176
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 242..262
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 126..153
score: 14.524
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 269..296
score: 9.764
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 154..181
score: 13.9
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 98..125
score: 12.632
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 328..355
score: 9.307
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 210..239
score: 15.376
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 240..267
score: 10.221
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 182..209
score: 15.895
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 300..350
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 190..249
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 134..191
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 97..148
NoneNo IPR availableGENE3D3.30.160.60coord: 130..143
e-value: 6.2E-8
score: 32.0
NoneNo IPR availableGENE3D3.30.160.60coord: 182..196
e-value: 1.3E-12
score: 47.0
NoneNo IPR availableGENE3D2.40.155.10coord: 285..504
e-value: 5.3E-15
score: 55.6
NoneNo IPR availableGENE3D3.30.160.60coord: 231..252
e-value: 5.7E-13
score: 48.1
NoneNo IPR availableGENE3D2.20.28.30coord: 197..216
e-value: 7.9E-12
score: 44.7
NoneNo IPR availableGENE3D3.30.160.60coord: 253..284
e-value: 9.7E-10
score: 38.2
NoneNo IPR availableGENE3D2.40.155.10coord: 144..181
e-value: 7.3E-25
score: 87.9
NoneNo IPR availableGENE3D2.40.155.10coord: 108..129
e-value: 7.3E-9
score: 35.5
NoneNo IPR availableGENE3D3.30.60.60coord: 32..107
e-value: 2.0E-5
score: 24.3
NoneNo IPR availableGENE3D3.30.160.60coord: 217..230
e-value: 2.4E-8
score: 33.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 212..234
e-value: 0.0038
score: 17.5
coord: 156..176
e-value: 0.019
score: 15.3
coord: 182..204
e-value: 9.9E-5
score: 22.5
coord: 126..148
e-value: 1.6E-4
score: 21.8
coord: 240..262
e-value: 0.014
score: 15.7
coord: 98..120
e-value: 1.5E-4
score: 21.9
coord: 269..291
e-value: 0.015
score: 15.6

Blast
BLAST of TCONS_00057916-protein vs. Swiss-Prot (Human)
Match: ZN888 (Zinc finger protein 888 OS=Homo sapiens GN=ZNF888 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.256e-46
Identity = 99/270 (36.67%), Postives = 144/270 (53.33%), Query Frame = 0
Query:   69 EIGTTAVDQTNQFDQNITHMTQTFEPVNLYVCDKCNRTFKQKSRYERHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTEERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQHQHVHTGLRPYGCEHENCGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFRTKSACRKHYLRHFKDGAS-YKCGVCEEMFKDEREYKMHLETHDEKQRTGAHRCGFCLRVFKSQEDLNAHVPLHESGLQYTCERCSARF 337
            E G T  D++        H  +  +P   Y C++C + F Q+S   RH + H  EK Y C+ C K F+R S+LE+H + HT E+ + C+VC  AF    HL +H+++H+ E+PY+C  C KTF   + L  H+ +HTG +PY C    CG+ F  ++ L RH   H+ EKP+ CKECDK F  KS   +H  R    G   YKC VC++ F+ +     H   H  ++    ++C  C +VF++Q  L  H  LH     Y CE C   F
Sbjct:  169 ECGKTFSDKSALLVHKTIHTGE--KP---YKCNECGKVFNQQSNLARHHRVHTGEKPYQCKECDKVFSRKSYLERHRRIHTGEKPYKCKVCDKAFRHDSHLAQHIVIHTREKPYKCNECGKTFGENSALLVHKTIHTGEKPYKC--NECGKVFNQQSNLARHHRLHTGEKPYKCKECDKVFSRKSHLERH--RRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEK---PYKCNECGKVFRTQSQLACHHRLHTGEKPYKCEECDKVF 426          

HSP 2 Score: 139.813 bits (351), Expect = 2.874e-35
Identity = 74/184 (40.22%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   98 YVCDKCNRTFKQKSRYERHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTEERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQHQHVHTGLRPYGCEHENCGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFRTKSACRKHYLRHFK---DGASYKCGVCEEMF 278
            Y C++C + F Q+S   RH + H  EK Y C+ C K F+R SHLE+H + HT E+ + C+VC  AF     L  H  +H+GE+PY+C  C K F  ++ L  H  +HTG +PY CE   C + F  K+ L  H   H+ EKP+ C+ CDK F      R H +RH +      SYKC  C ++F
Sbjct:  305 YKCNECGKVFNQQSNLARHHRLHTGEKPYKCKECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEKPYKCNECGKVFRTQSQLACHHRLHTGEKPYKCE--ECDKVFNIKSHLEIHRRVHTGEKPYKCRVCDKAFGKAFTSRSHLIRHQRIHTGQKSYKCHQCGKVF 486          

HSP 3 Score: 138.272 bits (347), Expect = 8.759e-35
Identity = 89/276 (32.25%), Postives = 136/276 (49.28%), Query Frame = 0
Query:   37 HTSNEASQPSEMESTVQTET-MEHDSQVIEPRKEIGTTAVDQTNQFDQNITHMTQTFEPVNLYVCDKCNRTFKQKSRYERHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTEERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQHQHVHTGLRPYGCEHENCGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFRTKSACRKHYLRHFKDGASYKCGVCEEMFKDEREYKMHLETHDEKQRTG--AHRCGFCLRVF 309
            HT  +  Q  E +     ++ +E   ++    K       D+  + D ++            Y C++C +TF + S    H   H  EK Y C  C K F + S+L +H + HT E+ + C+ C   F    HL RH  +H+GE+PY+C+VC+K F R + L  H  +HTG +PY C    CG+ F  ++ L  H   H+ EKP+ C+ECDK F  KS    H   H  +   YKC VC++ F      + HL  H ++  TG  +++C  C +VF
Sbjct:  215 HTGEKPYQCKECDKVFSRKSYLERHRRIHTGEKPYKCKVCDKAFRHDSHLAQHIVIHTREKPYKCNECGKTFGENSALLVHKTIHTGEKPYKCNECGKVFNQQSNLARHHRLHTGEKPYKCKECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEKPYKCN--ECGKVFRTQSQLACHHRLHTGEKPYKCEECDKVFNIKSHLEIHRRVHTGE-KPYKCRVCDKAFGKAFTSRSHLIRH-QRIHTGQKSYKCHQCGKVF 486          

HSP 4 Score: 134.42 bits (337), Expect = 1.916e-33
Identity = 92/274 (33.58%), Postives = 128/274 (46.72%), Query Frame = 0
Query:  115 RHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTEERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQHQHVHTGLRPYGCE-------HEN-------------------CGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFRTKSACRKHYLRHFKDGASYKCGVCEEMFKDEREYKMHLETHDEKQRTGA--HRCGFCLRVFKSQEDLNAHVPLHESGLQYTCERCSARFFTQVDFLKHTAKHFEESTLAVEQ 360
            RH + H  EK Y C  C KTF+  S L  H   HT E+ + C  CG  F    +L RH  VH+GE+PYQC+ C+K F+RK+ L +H+ +HTG +PY C+       H++                   CG+ F + + L  H   H+ EKP+ C EC K F  +S   +H+  H  +   YKC  C+++F      K HLE H  +  TG   ++C  C + F+    L  H  LH     Y C  C   F TQ     H   H  E     E+
Sbjct:  154 RHYRRHTGEKPYKCNECGKTFSDKSALLVHKTIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYQCKECDKVFSRKSYLERHRRIHTGEKPYKCKVCDKAFRHDSHLAQHIVIHTREKPYKCNECGKTFGENSALLVHKTIHTGEKPYKCNECGKVFNQQSNLARHHRLHTGE-KPYKCKECDKVFSR----KSHLERH-RRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEKPYKCNECGKVFRTQSQLACHHRLHTGEKPYKCEE 421          

HSP 5 Score: 119.783 bits (299), Expect = 1.334e-28
Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0
Query:   98 YVCDKCNRTFKQKSRYERHIQNHPSEKHYLCETCHKTFTRVSHLEKHIKTHTEERSHLCEVCGAAFILPHHLVRHMLVHSGERPYQCEVCNKTFTRKAGLTQHQHVHTGLRPYGCE--HENCGRYFTDKTTLRRHMMTHSSEKPFVCKECDKTFRTKS 253
            Y C +C++ F +KS  ERH + H  EK Y C+ C K F R S L  H + HT E+ + C  CG  F     L  H  +H+GE+PY+CE C+K F  K+ L  H+ VHTG +PY C    +  G+ FT ++ L RH   H+ +K + C +C K F  +S
Sbjct:  333 YKCKECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEKPYKCNECGKVFRTQSQLACHHRLHTGEKPYKCEECDKVFNIKSHLEIHRRVHTGEKPYKCRVCDKAFGKAFTSRSHLIRHQRIHTGQKSYKCHQCGKVFSLRS 490          
The following BLAST results are available for this feature:
BLAST of TCONS_00057916-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN8881.256e-4636.67Zinc finger protein 888 OS=Homo sapiens GN=ZNF888 ... [more]
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