TCONS_00057919-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057919-protein
Unique NameTCONS_00057919-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057919-protein ID=TCONS_00057919-protein|Name=TCONS_00057919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
KGSIILNLVLERHRIIIKGMSKGDFGISSNNYGAVYHRSSAVRDKDNFNG
LCDTVSGKIFVINKNISKLENISRTIDVIDKENEKKIHNLSQDTNKLANE
TKECFQNISEYTRAGRFEHLDHRQQQYNLLQDKLVREFENSLSRYHAIQN
VLSLKMKEVIEKEVSVNKDTSTLIDISTNKGGFDDDDDDEELLIDHQQER
TQQILQHEEELEQVRDRNQRIQQIEEDILNVNEIFRDLATIVHEQGETID
ISLNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036522XLOC_036522Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057919TCONS_00057919Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..227
NoneNo IPR availableGENE3D1.20.58.70coord: 42..251
e-value: 1.4E-27
score: 96.3
NoneNo IPR availablePFAMPF14523Syntaxin_2coord: 56..159
e-value: 2.3E-11
score: 43.8
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 211..250
score: 11.153
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 46..250

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057919-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top