TCONS_00057926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057926-protein
Unique NameTCONS_00057926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057926-protein ID=TCONS_00057926-protein|Name=TCONS_00057926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
EKIFIIMGRSSKDKRDVYYRLAKEGGWRARSAFKLLQINEEFDLFTGVKR
VVDLCAAPGSWSQVLSRKLIEERKEESEEANDVKIVAVDLQAMAPLPGVI
QLQGDITKVSTANEIIKHFEGEPADLVVCDGAPDVTGLHDIDEYIQGQLL
LAAFNITSHVLKKGGNFVAKIFRGKDVDLLYSQLKLFFPEVTVCKPRSSR
NSSIESFVVCLNYSPPDGYTPTMANPLLNQDLDYSSLQGINRVVTPFMAC
GDLNSYDSDMTYPLQLEGEKEYQQLPPTQAPIKPPYQTACDMKKKNLLQN
EQSNVKESSKDIVDDEKAVSEGMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036526XLOC_036526Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057926TCONS_00057926Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR015507rRNA-MeTfrase_E
IPR028590RNA_methyltr_E_Trm7
IPR029063SAM-dependent_MTases
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
GO:0001510RNA methylation
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0008175tRNA methyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0001510 RNA methylation
biological_process GO:0008033 tRNA processing
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008175 tRNA methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 7..232
e-value: 3.4E-65
score: 219.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..324
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 50..174
e-value: 0.00181428
score: 35.0983
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 27..213
e-value: 2.6E-70
score: 236.0
IPR015507Ribosomal RNA large subunit methyltransferase EHAMAPMF_01547RNA_methyltr_Ecoord: 11..214
score: 32.279
IPR028590tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7HAMAPMF_03162RNA_methyltr_E_TRM7coord: 7..262
score: 34.045
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 26..214

Blast
BLAST of TCONS_00057926-protein vs. Swiss-Prot (Human)
Match: TRM7 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens GN=FTSJ1 PE=1 SV=2)

HSP 1 Score: 392.889 bits (1008), Expect = 1.241e-137
Identity = 198/297 (66.67%), Postives = 234/297 (78.79%), Query Frame = 0
Query:    7 MGRSSKDKRDVYYRLAKEGGWRARSAFKLLQINEEFDLFTGVKRVVDLCAAPGSWSQVLSRKLIEERKEESEEANDVKIVAVDLQAMAPLPGVIQLQGDITKVSTANEIIKHFEGEPADLVVCDGAPDVTGLHDIDEYIQGQLLLAAFNITSHVLKKGGNFVAKIFRGKDVDLLYSQLKLFFPEVTVCKPRSSRNSSIESFVVCLNYSPPDGYTPTMANPLLNQ--DLDYSSLQGINRVVTPFMACGDLNSYDSDMTYPLQLEGEKEYQQLPPTQAPIKPPYQTACDMKKKNLLQNE 301
            MGR+SKDKRDVYYRLAKE GWRARSAFKLLQ+++EF LF GV R VDLCAAPGSWSQVLS+K+  +            +VAVDLQAMAPLPGV+Q+QGDIT++STA EII+HF+G PADLVVCDGAPDVTGLHD+DEY+Q QLLLAA NI +HVLK GG FVAKIFRG+DV LLYSQL++FF  V   KPRSSRNSSIE+F VC  Y PP+G+ P ++ PLL+   D D++ L G  R++ PF+ CGDL+SYDSD +YPL LEG  EY+  PPTQ PI PPYQ AC +K+K  L  E
Sbjct:    1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQ--------GSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKPLLDHSYDPDFNQLDGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQLAKE 289          
The following BLAST results are available for this feature:
BLAST of TCONS_00057926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRM71.241e-13766.67Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
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