TCONS_00057965-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057965-protein
Unique NameTCONS_00057965-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057965-protein ID=TCONS_00057965-protein|Name=TCONS_00057965-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
MPDNNNGIGAPISPTRIDQTQRQSLHVFLPNGEFRAVKFGDQSDLKSIIE
IVIRRLGANIPLTSKYYGIKLQNSETKNFHWLNPSLTMIEIKSKHRHENT
DDTWKYKLRIRYLPVVIKDLYGVDKTTFYFLYDQVRHDYMNEIANSVDID
LAFQLGVLEMKRFFNNMPQVALDKKSNLDFIEKEIGLQRXXXXXXL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036538XLOC_036538Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057965TCONS_00057965Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR000299FERM_domain
IPR019748FERM_central
IPR029071Ubiquitin-rel_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 113..193
e-value: 2.3E-19
score: 69.4
NoneNo IPR availableGENE3D3.10.20.90coord: 15..112
e-value: 2.8E-24
score: 84.8
IPR000299FERM domainPROSITEPS50057FERM_3coord: 23..196
score: 22.098
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 127..175
e-value: 1.92445E-5
score: 39.5371
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 119..189
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 21..114

Blast
[Close]
BLAST of TCONS_00057965-protein vs. Swiss-Prot (Human)
Match: FAK2 (Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=PTK2B PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 6.231e-37
Identity = 65/162 (40.12%), Postives = 104/162 (64.20%), Query Frame = 0 
Query:   28 FLPNGEFRAVKFGDQSDLKSIIEIVI--RRLGANIPLTSKYYGIKLQNSETKNFHWLNPSLTMIEIKSKHRHENTDDTWKYKLRIRYLPVVIKDLYGVDKTTFYFLYDQVRHDYMNEIANSVDIDLAFQLGVLEMKRFFNNMPQVALDKKSNLDFIEKEIGL 187
            F P   F+ VK   Q++++ II  ++   R+G NI L ++ YG++L++ ++   HWL+P +T+ E++ K+   + +  W+Y L+IRYLP    +    D+TT  + Y Q+R+DYM   A+ V   +A QLG LE++RFF +MP  ALDKKSN + +EKE+GL
Sbjct:   50 FNPGKNFKLVKCTVQTEIREIITSILLSGRIGPNIRL-AECYGLRLKHMKSDEIHWLHPQMTVGEVQDKYECLHVEAEWRYDLQIRYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGL 210
The following BLAST results are available for this feature:
BLAST of TCONS_00057965-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAK26.231e-3740.12Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=... [more]
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