Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00057972-protein ID=TCONS_00057972-protein|Name=TCONS_00057972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp MENSKSLEASYSSKTNSTVVLVEPSNSSTGNKGKLTFHLALGAIVCFAGS SLQFGYNLSVINAPQSVIEKHFENVKRFKEFLWPFAVAIFAVGGMGGAFI GPYIAKAIGRKRTLMLNNALAISGGIFLGVTKMADSVTILVIGRFLVGIN AGVNTVVAPMYLSEIAPINLRGSLGTLNQFGIVSGLLLGNILGLGEILGN ENGWPYLFAITGVIGVLQLCVLPFCSESPRYLLAIKKDEANAIINLQKLR GSDDVQAEIQEIKMDAEKEASQETVSIIELFKNSYYHKPLLISVVLQLAQ QLSGIGGILYYSTELFKEIGLSIPESQKASCGVGALSVIMTLVCMVLVDK KGRRFLLLVGLGGMIVLYAVTTVAFKYVEDKKDWAPILGVVCTLGAVVFF QAGPGAIPWFIVAELFSQNSLSAAVSVAGPMNWLGNFVVGLLFPVIKDKV HPYTFIPFIVLLVIFFAFTYLVVPETKGLSIAQINRILRKDGGAAGYPDE ADKKDEGVTPYTC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0022891 substrate-specific transmembrane transporter activity
GO:0022857 transmembrane transporter activity
GO:0005215 transporter activity
Vocabulary: Biological Process
Term Definition
GO:0055085 transmembrane transport
Vocabulary: Cellular Component
Term Definition
GO:0016020 membrane
GO:0016021 integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0055085
transmembrane transport
cellular_component
GO:0016021
integral component of membrane
cellular_component
GO:0016020
membrane
molecular_function
GO:0022891
substrate-specific transmembrane transporter activity
molecular_function
GO:0022857
transmembrane transporter activity
molecular_function
GO:0005215
transporter activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 Score = 41.67 Score = 35.79 Score = 50.38 Score = 28.03 Score = 31.47 Expect = 4.3E-103 / Score = 343.5 Expect = 1.7E-33 / Score = 115.2 Expect = 1.1E-24 / Score = 86.4 Expect = 5.5E-113 / Score = 378.1 Score = Score = 39.388 Expect = 3.71829E-19 / Score = 86.5989 Score = Sequence PR00171 TIGR00879 G3DSA:1.20.1250.20 G3DSA:1.20.1250.20 PF00083 PS00217 PS50850 cd06174 SSF103473
IPR Term IPR Description Source Source Term Source Description Alignment
IPR003663 Sugar/inositol transporter PRINTS PR00171 SUGRTRNSPORT coord: 141..160 score: 35.79 coord: 390..411 score: 28.03 coord: 51..61 score: 41.67 coord: 413..425 score: 31.47 coord: 300..310 score: 50.38
IPR003663 Sugar/inositol transporter TIGRFAM TIGR00879 TIGR00879 coord: 29..484 e-value: 4.3E-103 score: 343.5
None No IPR available GENE3D 1.20.1250.20 coord: 260..495 e-value: 1.7E-33 score: 115.2
None No IPR available GENE3D 1.20.1250.20 coord: 37..242 e-value: 1.1E-24 score: 86.4
IPR005828 Major facilitator, sugar transporter-like PFAM PF00083 Sugar_tr coord: 46..487 e-value: 5.5E-113 score: 378.1
IPR005829 Sugar transporter, conserved site PROSITE PS00217 SUGAR_TRANSPORT_2 coord: 146..171
IPR020846 Major facilitator superfamily domain PROSITE PS50850 MFS coord: 43..477 score: 39.388
IPR020846 Major facilitator superfamily domain CDD cd06174 MFS coord: 44..473 e-value: 3.71829E-19 score: 86.5989
IPR020846 Major facilitator superfamily domain SUPERFAMILY 103473 MFS general substrate transporter coord: 38..484
Blast
BLAST of TCONS_00057972-protein vs. Swiss-Prot (Human)
Match:
GTR1 (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)
HSP 1 Score: 388.652 bits (997), Expect = 1.350e-130
Identity = 212/495 (42.83%), Postives = 306/495 (61.82%), Query Frame = 0
Query: 22 VEPSNSSTGNKGKLTFHLALGAIVCFAGSSLQFGYNLSVINAPQSVIEKHFEN--VKRFKE--------FLWPFAVAIFAVGGMGGAFIGPYIAKAIGRKRTLMLNNALAISGGIFLGVTKMADSVTILVIGRFLVGINAGVNTVVAPMYLSEIAPINLRGSLGTLNQFGIVSGLLLGNILGLGEILGNENGWPYLFAITGVIGVLQLCVLPFCSESPRYLLAIKKDEANAIINLQKLRGSDDVQAEIQEIKMDAEKEASQETVSIIELFKNSYYHKPLLISVVLQLAQQLSGIGGILYYSTELFKEIGLSIPESQKASCGVGALSVIMTLVCMVLVDKKGRRFLLLVGLGGMIVLYAVTTVAFKYVEDKKDWAPILGVVCTLGAVVFFQAGPGAIPWFIVAELFSQNSLSAAVSVAGPMNWLGNFVVGLLFPVIKDKVHPYTFIPFIVLLVIFFAFTYLVVPETKGLSIAQINRILRKDGGAAGYPDEADKKDE 506
+EPS+ G+L LA+G V SLQFGYN VINAPQ VIE+ + V R+ E LW +VAIF+VGGM G+F GR+ ++++ N LA + +G +K+ S +L++GRF++G+ G+ T PMY+ E++P LRG+LGTL+Q GIV G+L+ + GL I+GN++ WP L +I + +LQ VLPFC ESPR+LL + +E A L+KLRG+ DV ++QE+K ++ + ++ V+I+ELF++ Y +P+LI+VVLQL+QQLSGI + YYST +F++ G+ P A+ G G ++ T+V + +V++ GRR L L+GL GM + T+A +E + W L +V G V FF+ GPG IPWFIVAELFSQ AA++VAG NW NF+VG+ F ++ PY FI F VLLV+FF FTY VPETKG + +I R+ G + ++DK E
Sbjct: 1 MEPSSKKL--TGRLM--LAVGGAVL---GSLQFGYNTGVINAPQKVIEEFYNQTWVHRYGESILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQP--VYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLE-QLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGAS-----QSDKTPE 480
The following BLAST results are available for this feature:
BLAST of TCONS_00057972-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M E N S K S L E A S Y S S K T N S T V V L V E P S N S S T G N K G K L T F H L A L G A I V C F A G S S L Q F G Y N L S V I N A P Q S V I E K H F E N V K R F K E F L W P F A V A I F A V G G M G G A F I G P Y I A K A I G R K R T L M L N N A L A I S G G I F L G V T K M A D S V T I L V I G R F L V G I N A G V N T V V A P M Y L S E I A P I N L R G S L G T L N Q F G I V S G L L L G N I L G L G E I L G N E N G W P Y L F A I T G V I G V L Q L C V L P F C S E S P R Y L L A I K K D E A N A I I N L Q K L R G S D D V Q A E I Q E I K M D A E K E A S Q E T V S I I E L F K N S Y Y H K P L L I S V V L Q L A Q Q L S G I G G I L Y Y S T E L F K E I G L S I P E S Q K A S C G V G A L S V I M T L V C M V L V D K K G R R F L L L V G L G G M I V L Y A V T T V A F K Y V E D K K D W A P I L G V V C T L G A V V F F Q A G P G A I P W F I V A E L F S Q N S L S A A V S V A G P M N W L G N F V V G L L F P V I K D K V H P Y T F I P F I V L L V I F F A F T Y L V V P E T K G L S I A Q I N R I L R K D G G A A G Y P D E A D K K D E G V T P Y T C 50 100 150 200 250 300 350 400 450 500 Expect = 1.35e-130 / Id = 42.83 Sequence GTR1
Match Name E-value Identity Description
GTR1 1.350e-130 42.83 Solute carrier family 2, facilitated glucose trans... [more]
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