TCONS_00057972-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057972-protein
Unique NameTCONS_00057972-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length513

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057972-protein ID=TCONS_00057972-protein|Name=TCONS_00057972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MENSKSLEASYSSKTNSTVVLVEPSNSSTGNKGKLTFHLALGAIVCFAGS
SLQFGYNLSVINAPQSVIEKHFENVKRFKEFLWPFAVAIFAVGGMGGAFI
GPYIAKAIGRKRTLMLNNALAISGGIFLGVTKMADSVTILVIGRFLVGIN
AGVNTVVAPMYLSEIAPINLRGSLGTLNQFGIVSGLLLGNILGLGEILGN
ENGWPYLFAITGVIGVLQLCVLPFCSESPRYLLAIKKDEANAIINLQKLR
GSDDVQAEIQEIKMDAEKEASQETVSIIELFKNSYYHKPLLISVVLQLAQ
QLSGIGGILYYSTELFKEIGLSIPESQKASCGVGALSVIMTLVCMVLVDK
KGRRFLLLVGLGGMIVLYAVTTVAFKYVEDKKDWAPILGVVCTLGAVVFF
QAGPGAIPWFIVAELFSQNSLSAAVSVAGPMNWLGNFVVGLLFPVIKDKV
HPYTFIPFIVLLVIFFAFTYLVVPETKGLSIAQINRILRKDGGAAGYPDE
ADKKDEGVTPYTC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036540XLOC_036540Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057972TCONS_00057972Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003663Sugar/inositol_transpt
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022891substrate-specific transmembrane transporter activity
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0022891 substrate-specific transmembrane transporter activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500Expect = 4.3E-103 / Score = 343.5Expect = 1.7E-33 / Score = 115.2Expect = 1.1E-24 / Score = 86.4Expect = 5.5E-113 / Score = 378.1Score = 39.388Expect = 3.71829E-19 / Score = 86.5989Score = SequencePR00171TIGR00879G3DSA:1.20.1250.20G3DSA:1.20.1250.20PF00083PS00217PS50850cd06174SSF103473
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003663Sugar/inositol transporterPRINTSPR00171SUGRTRNSPORTcoord: 141..160
score: 35.79
coord: 390..411
score: 28.03
coord: 51..61
score: 41.67
coord: 413..425
score: 31.47
coord: 300..310
score: 50.38
IPR003663Sugar/inositol transporterTIGRFAMTIGR00879TIGR00879coord: 29..484
e-value: 4.3E-103
score: 343.5
NoneNo IPR availableGENE3D1.20.1250.20coord: 260..495
e-value: 1.7E-33
score: 115.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 37..242
e-value: 1.1E-24
score: 86.4
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 46..487
e-value: 5.5E-113
score: 378.1
IPR005829Sugar transporter, conserved sitePROSITEPS00217SUGAR_TRANSPORT_2coord: 146..171
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 43..477
score: 39.388
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 44..473
e-value: 3.71829E-19
score: 86.5989
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 38..484

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057972-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MENSKSLEASYSSKTNSTVVLVEPSNSSTGNKGKLTFHLALGAIVCFAGSSLQFGYNLSVINAPQSVIEKHFENVKRFKEFLWPFAVAIFAVGGMGGAFIGPYIAKAIGRKRTLMLNNALAISGGIFLGVTKMADSVTILVIGRFLVGINAGVNTVVAPMYLSEIAPINLRGSLGTLNQFGIVSGLLLGNILGLGEILGNENGWPYLFAITGVIGVLQLCVLPFCSESPRYLLAIKKDEANAIINLQKLRGSDDVQAEIQEIKMDAEKEASQETVSIIELFKNSYYHKPLLISVVLQLAQQLSGIGGILYYSTELFKEIGLSIPESQKASCGVGALSVIMTLVCMVLVDKKGRRFLLLVGLGGMIVLYAVTTVAFKYVEDKKDWAPILGVVCTLGAVVFFQAGPGAIPWFIVAELFSQNSLSAAVSVAGPMNWLGNFVVGLLFPVIKDKVHPYTFIPFIVLLVIFFAFTYLVVPETKGLSIAQINRILRKDGGAAGYPDEADKKDEGVTPYTC50100150200250300350400450500Expect = 1.35e-130 / Id = 42.83SequenceGTR1
Match NameE-valueIdentityDescription
GTR11.350e-13042.83Solute carrier family 2, facilitated glucose trans... [more]
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