TCONS_00058012-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058012-protein
Unique Name	TCONS_00058012-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	183

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058012-protein ID=TCONS_00058012-protein|Name=TCONS_00058012-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MEFEEVSKKSTKKYKNQMSKDQPIHLSTRNFKTPSISPEVDLTWFLLLGV
ASAVRLYKLSKPNAVVFDELHYGKFTSYFVQERFFFDVHPPLGKLLFAAA
GYLTGFDGSFNFPKIGEEVPDSQVQSVMYLRMVTSFFSIFLVPLIYEIVL
ELSSSYWFAVVGALLVCFGRKNLIICLGDTFFL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036568	XLOC_036568	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058012	TCONS_00058012	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003342	Glyco_trans_39/83

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0000030	mannosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006493	protein O-linked glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006493	protein O-linked glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0000030	mannosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003342	Glycosyl transferase family 39/83	PFAM	PF02366	PMT	coord: 47..168 e-value: 2.1E-31 score: 109.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Blast

[Close]

BLAST of TCONS_00058012-protein vs. Swiss-Prot (Human)
Match: POMT2 (Protein O-mannosyl-transferase 2 OS=Homo sapiens GN=POMT2 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 7.700e-25
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 0

Query:    2 EFEEVSKKSTKKYKNQMSKDQPIHLSTRNFKTPSISPEV--DLTWFLLLGVAS----AVRLYKLSKPNAVVFDELHYGKFTSYFVQERFFFDVHPPLGKLLFAAAGYLTGFDGSFNFPKIGEEVPDSQVQSVMYLRMVTSFFSIFLVPLIYEIVLELS 153
            E      +   +      +D       R+ K P+        + W+ LL + +    A R ++L +P  + +DE H+GK  SY++   FFFDVHPPLGK+L   AGYL+G+DG+F F K G++    +  S M +R   +F   +LVP  Y  VL+LS
Sbjct:   13 ELRPRRGRCGPQAARAAGRDVAAEAVARSPKRPAWGSRRFEAVGWWALLALVTLLSFATRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDKY---EHHSYMGMRGFCAFLGSWLVPFAYLTVLDLS 167

The following BLAST results are available for this feature:

BLAST of TCONS_00058012-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058012-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
POMT2	7.700e-25	34.18	Protein O-mannosyl-transferase 2 OS=Homo sapiens G...	[more]

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TCONS_00058012-protein (polypeptide) - C. hemisphaerica