TCONS_00058274-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058274-protein
Unique NameTCONS_00058274-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058274-protein ID=TCONS_00058274-protein|Name=TCONS_00058274-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
MVTLVKTKTEFDSTLSNNPLVAVDFTASWCGPCKMIGPKFEAMAAQFPSI
KFIKVDVDENSETSEALGIAAMPTFFFYANGEKMKEVVGASEDKLREALQ
ELSA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036709XLOC_036709Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058274TCONS_00058274Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
molecular_function GO:0015035 protein disulfide oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 21..29
score: 55.49
coord: 68..79
score: 31.2
coord: 29..38
score: 64.83
NoneNo IPR availableGENE3D3.40.30.10coord: 1..104
e-value: 5.1E-32
score: 110.8
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 8..86
e-value: 2.5E-18
score: 60.7
NoneNo IPR availableSFLDSFLDG00337Thioredoxin-likecoord: 2..101
e-value: 5.1E-33
score: 108.1
NoneNo IPR availableCDDcd02947TRX_familycoord: 10..100
e-value: 2.23418E-37
score: 122.282
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 4..101
e-value: 2.3E-29
score: 101.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..104
score: 13.236
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 1..103
e-value: 6.6E-30
score: 101.2
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 2..102

Blast
[Close]
BLAST of TCONS_00058274-protein vs. Swiss-Prot (Human)
Match: THIO (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 1.970e-25
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:    1 MVTLVKTKTEFDSTL--SNNPLVAVDFTASWCGPCKMIGPKFEAMAAQFPSIKFIKVDVDENSETSEALGIAAMPTFFFYANGEKMKEVVGASEDKLREALQEL 102
            MV  +++KT F   L  + + LV VDF+A+WCGPCKMI P F +++ ++ ++ F++VDVD+  + +    +  MPTF F+  G+K+ E  GA+++KL   + EL
Sbjct:    1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104
The following BLAST results are available for this feature:
BLAST of TCONS_00058274-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THIO1.970e-2539.42Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3[more]
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