TCONS_00058381-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058381-protein
Unique NameTCONS_00058381-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058381-protein ID=TCONS_00058381-protein|Name=TCONS_00058381-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
TQQDDDLESGFDDTADQHKRSFQRKTAPEYDRNDEMDILHKKAPVTEKDD
DLESGFDDTADQHKRSFQRKTAPEYDRNDEMDILHKAPVTQQDDDLESGF
DDTADQHKRSFQRKTAPEYDRNVEMDILHKAPVTQQDDDLESGFDDTADQ
HKRSFQRKTAPEYDRNDEMDILHKKAPVTEKDDDLESGFDDTAASIARPI
RKAKMRNSKESTDSVTTREPGIRKRGKENTKAKKTSASNNNSMKRKRKEE
KKETIMCTGCGEKYDEKTDDNRWVQCDACEQWCHLQCSGIKYRTSKYDTI
NLENIPFKCRTSCLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036772XLOC_036772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058381TCONS_00058381Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 256..314
e-value: 0.0053
score: 26.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 197..314
e-value: 2.0E-10
score: 40.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..250
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 250..309

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058381-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top