TCONS_00058665-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058665-protein
Unique NameTCONS_00058665-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058665-protein ID=TCONS_00058665-protein|Name=TCONS_00058665-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MRSYTKKNLKEVEEQMTGGGQRPTINHYMKCRKRRVSARQLEKRQLSIVK
TPVHEKGDFAPLPIEVMFRIIKFIPLVSLGSLTLTSKQMRDIIIMYVHSQ
EGARRVIPVVQNIPEHSDLDSDEYKSESKRCHTHYKQLGVMLKRTTCLFS
TRDRLAEVGKILDQLRDSHVRICTKLGSDLAYSCYGIFLHAFIAGWEDDE
KSKSFQAIKGASLLEERIGYLMKSKPGTMPGYERYIRVFCREIFLNKASK
TEKGFWMAQILKPYPIFFQARLLFILYGPTDLENDDLIWDEMAVSSDIAT
EDLKELAEGMVALQDDQRGLWSADDIISIFDEITTISMDWDIENIAVFMK
ECGDTMCCEVLGNKAINGX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036956XLOC_036956Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058665TCONS_00058665Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 58..179
e-value: 0.002
score: 18.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 56..93
score: 8.862
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 51..93

Blast
[Close]
BLAST of TCONS_00058665-protein vs. Swiss-Prot (Human)
Match: FBX47 (F-box only protein 47 OS=Homo sapiens GN=FBXO47 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 4.576e-56
Identity = 98/318 (30.82%), Postives = 176/318 (55.35%), Query Frame = 0 
Query:   52 PVHEKGDFAPLPIEVMFRIIKFIPLVSLGSLTLTSKQMRDIIIMYVHSQEGARRVIPVVQNIPEHSDLDSDEYKSESKRCHTHYKQLGVMLKRTTCLFSTRDRLAEVGKILDQLRDSHVRICTKLGSDLAYSCYGIFLHAFIAGWEDDEKSKSFQAIKGASLLEERIGYLMKSKPGTMPGYERYIRVFCREIFLNK-ASKTEKGFWMAQILKPYPIFFQARLLFILYGPTDLENDDLIWDEMAVSSDIATEDLKELAEGMVALQDDQRGLWSADDIISIFDEITTISMDWDIENIAVFMKECGDTMCCEVLGNKAING 368
            P+   G+F  LP+E+   I+K++ +  +  L++ SK +   II Y+ +  G++R++     + +  +L+  + + +S     HY+ LG++ KR T L  T++RL  + KIL ++       C      L  +CYG+FL    AGW++ E  + +  +   + L  +I   + SKPG+    E  IR+FCR + L+    +++  FW+ +ILKP+P+  QARLL+I++GP   ++  ++W EM +        LK LA+ +  L D     W+ADD+IS+ DE++ +  +W +EN A  +   G+ +C   + +KA+NG
Sbjct:   37 PISTFGNFKALPLEIFQIILKYLSVKDISMLSMVSKTVSQHIINYISTSSGSKRLL-----LQDFHNLELPDRRQDSAILE-HYRSLGLLFKRCTLLLPTKERLKYIHKILTEVSCFKFNGCAAPMQCLGLTCYGMFLQTLTAGWDELECHRVYNFLCELTNLCRKIQMAVCSKPGSAQKLELRIRLFCRNVLLDHWTHRSDSAFWLTRILKPWPMVNQARLLYIIFGPISPQDGQVVWQEM-IEEPTDEFSLKGLADAIKLLYDASTKEWTADDVISLVDELSVVPREWLLENNARLLMLSGNNICFSFMASKAVNG 347
The following BLAST results are available for this feature:
BLAST of TCONS_00058665-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBX474.576e-5630.82F-box only protein 47 OS=Homo sapiens GN=FBXO47 PE... [more]
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