TCONS_00058673-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058673-protein
Unique NameTCONS_00058673-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length657

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058673-protein ID=TCONS_00058673-protein|Name=TCONS_00058673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=657bp
MPAVKGEGMRGLQVFISDIRACKSKESEMKRINKELANIRSKFKGDKQLD
GYQKKKYVCKLLFIFLLGNDIDFGHMEAVNLLSSNKYSEKQIGYLFISVL
VSANNELMKLIIQHVKNDLNSSNPIFVSLALQCIANIASPEMLEGVGPDV
PKLLISGETADGVKQSASLCLLKLFRINSSVLPRTAEMASRICQMINDSN
LGVVTAAASLILEFVQKFPDDYKGCVNLAINRLAKIVTSSDLKDYTYYFV
PAPWLSVKLLKLLQLYPTPDAAQLGKLTECLEHILNKAQEAPKSKKVQHS
NSKNAVLFEAINLIIHLDSDQHLLIRACNQLGQYLTHRETNLRYLALESL
CSLANTEFSAEAVRKHQETVINALKTERDVSVRQRAVDLLYVMCDSTNAI
EIVAEMLTYLKQADFAIREELVLKIAILAEKYATDYSWYVDTILELIRVG
GDFVGEEVWYRVIQVIINRDDIQGYAAKTVFEAIQAHDCHENMIKVGGYI
LGEFGNLIAGDPRSSPLVQFQLLHHKFPLANVPTKALLMSAYIKLINLFP
EIKETIQNVLTSETNIRNADTEIQQRAVEYLQLSRIASQDVLATVLEEMP
PFPERESSLLAKLKKNKGGAEKDDKDPVEPPAPAAITAPAAAQRPTPAAR
PPPIQAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036962XLOC_036962Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058673TCONS_00058673Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017107AP1_complex_gsu
IPR002553Clathrin/coatomer_adapt-like_N
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Molecular Function
TermDefinition
GO:0008565protein transporter activity
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0030117membrane coat
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030117 membrane coat
molecular_function GO:0005488 binding
molecular_function GO:0008565 protein transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 606..657
IPR017107Adaptor protein complex AP-1, gamma subunitPIRSFPIRSF037094AP1_gammacoord: 8..633
e-value: 6.2E-119
score: 396.6
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 29..585
e-value: 3.8E-129
score: 431.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..618
e-value: 2.2E-138
score: 461.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..588

Blast
[Close]
BLAST of TCONS_00058673-protein vs. Swiss-Prot (Human)
Match: AP2A2 (AP-2 complex subunit alpha-2 OS=Homo sapiens GN=AP2A2 PE=1 SV=2)

HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0
Identity = 464/663 (69.98%), Postives = 558/663 (84.16%), Query Frame = 0 
Query:    1 MPAV-KGEGMRGLQVFISDIRACKSKESEMKRINKELANIRSKFKGDKQLDGYQKKKYVCKLLFIFLLGNDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVSANNELMKLIIQHVKNDLNSSNPIFVSLALQCIANIASPEMLEGVGPDVPKLLISGETADGVKQSASLCLLKLFRINSSVLPRTAEMASRICQMINDSNLGVVTAAASLILEFVQKFPDDYKGCVNLAINRLAKIVTS--SDLKDYTYYFVPAPWLSVKLLKLLQLYPTPDAAQLGKLTECLEHILNKAQEAPKSKKVQHSNSKNAVLFEAINLIIHLDSDQHLLIRACNQLGQYLTHRETNLRYLALESLCSLANTEFSAEAVRKHQETVINALKTERDVSVRQRAVDLLYVMCDSTNAIEIVAEMLTYLKQADFAIREELVLKIAILAEKYATDYSWYVDTILELIRVGGDFVGEEVWYRVIQVIINRDDIQGYAAKTVFEAIQAHDCHENMIKVGGYILGEFGNLIAGDPRSSPLVQFQLLHHKFPLANVPTKALLMSAYIKLINLFPEIKETIQNVLTSETNIRNADTEIQQRAVEYLQLSRIASQDVLATVLEEMPPFPERESSLLAKLKKNKGGAEKDDKDPVE-----------PPAPAAITAPAAAQRPTPAA 649
            MPAV KG+GMRGL VFISDIR CKSKE+E+KRINKELANIRSKFKGDK LDGY KKKYVCKLLFIFLLG+DIDFGHMEAVNLLSSN+Y+EKQIGYLFISVLV++N+EL++LI   +KNDL S NP F+ LAL CIA++ S EM E    ++PK+L++G+T D VKQSA+LCLL+L+R +  ++P   +  SR+  ++ND +LGVVTAA SLI    QK P+++K  V+LA++RL++IVTS  +DL+DYTYYFVPAPWLSVKLL+LLQ YP PD A  G+LTECLE ILNKAQE PKSKKVQHSN+KNAVLFEAI+LIIH DS+ +LL+RACNQLGQ+L HRETNLRYLALES+C+LA++EFS EAV+ H ETVINALKTERDVSVRQRAVDLLY MCD +NA +IVAEML+YL+ AD++IREE+VLK+AILAEKYA DY+WYVDTIL LIR+ GD+V EEVWYRVIQ++INRDD+QGYAAKTVFEA+QA  CHEN++KVGGYILGEFGNLIAGDPRSSPL+QF LLH KF L +VPT+ALL+S YIK +NLFPE+K TIQ+VL S++ +RNAD E+QQRAVEYL+LS +AS D+LATVLEEMPPFPERESS+LAKLKK KG +   D +  +            PAPA+ +   A   P+P+A
Sbjct:    1 MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVP-MGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAPQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFHLLHSKFHLCSVPTRALLLSTYIKFVNLFPEVKPTIQDVLRSDSQLRNADVELQQRAVEYLRLSTVASTDILATVLEEMPPFPERESSILAKLKKKKGPSTVTDLEDTKRDRSVDVNGGPEPAPASTS---AVSTPSPSA 659
The following BLAST results are available for this feature:
BLAST of TCONS_00058673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AP2A20.000e+069.98AP-2 complex subunit alpha-2 OS=Homo sapiens GN=AP... [more]
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