TCONS_00058733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058733-protein
Unique NameTCONS_00058733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058733-protein ID=TCONS_00058733-protein|Name=TCONS_00058733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
GGGGGGSVFGQSNQSGTTVKFQPVVSTEQTQKSGISMQVKTHTQCITVMD
AYKDKSIEELRFEDYSANRKGSSGTTGGFGSTAGGTGLFGNTSSSGGTSL
FGTNNTAASKPSGFGGFGSTSTSGGLFGGNTGTSLFGAKTTSSXWRFWCN
ILFRWIIRWYFFRWSVWWKISGYNGDNWNLIVWKCRWRSISWWKHRD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036996XLOC_036996Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058733TCONS_00058733Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00058733-protein vs. Swiss-Prot (Human)
Match: NUP98 (Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4)

HSP 1 Score: 92.4337 bits (228), Expect = 6.198e-22
Identity = 67/154 (43.51%), Postives = 86/154 (55.84%), Query Frame = 0 
Query:    2 GGGGGSVFGQSN----QSGTTVKFQPVVSTEQTQKSGISMQVKTHTQCITVMDAYKDKSIEELRFEDYSANRKGSSG------TTGGFGS---TAGGTGLFGNTSSSGGTSLFGTNNTAASKPSGFG----GFGSTSTSGGLFG--GNTGTSLF 136
            G   GS+FG S+     +GTT+KF P   T+   K+G+S  + T  QCIT M  Y+ KS+EELR EDY ANRKG         TTG FGS   T+  TGLF +++++ G + +G N TA      FG    GFG  +  GGLFG      TSLF
Sbjct:  141 GSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGLFSSSTTNSGFA-YGQNKTA------FGTSTTGFG--TNPGGLFGQQNQQTTSLF 285
The following BLAST results are available for this feature:
BLAST of TCONS_00058733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUP986.198e-2243.51Nuclear pore complex protein Nup98-Nup96 OS=Homo s... [more]
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