TCONS_00058867-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058867-protein
Unique Name	TCONS_00058867-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	291

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058867-protein ID=TCONS_00058867-protein|Name=TCONS_00058867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MKNLTYEEIVSEIFKLKKRRDECVECLKLKFPSVSLGTFSSIYSQIYQRK
TKKDFPKHHRKTTIAKYTQQYHISIANKDQEGFICRLAENVDFPPTLIAR
IILEEVFKENPNLKVTKAFITQCMKKTEEIPDKILSREVGICIKNDQLCG
PIIESLKHEIGLKYEQVLHDCLKKQDISYYHEDVLRKEGYDKTPDFKLVV
PILVDTHAIHWIESKALFGDHESHSGYLENQFWSYTNRFGPGLVIYWFGF
IDELDINLERGVMLKDEFPTNLMTLESLLDDDYENFSIASF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037083	XLOC_037083	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058867	TCONS_00058867	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029404	DUF_TPD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 291..291
IPR029404	Protein of unknown function with TPD sequence-motif	PFAM	PF14811	TPD	coord: 132..268 e-value: 6.7E-52 score: 174.9

Blast

[Close]

BLAST of TCONS_00058867-protein vs. Swiss-Prot (Human)
Match: CO041 (Uncharacterized protein C15orf41 OS=Homo sapiens GN=C15orf41 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 6.190e-84
Identity = 125/270 (46.30%), Postives = 172/270 (63.70%), Query Frame = 0

Query:    6 YEEIVSEIFKLKKRRDECVECLKLKFPSVSLGTFSSIYSQIYQRKTKKDFPKHHRKTTIAKYTQQYHISIANKDQEGFICRLAENVDFPPTLIARIILEEVFKENPNLKVTKAFITQCMKKTEEIPDKILSREVGICIKNDQLCGPIIESLKHEIGLKYEQVLHDCLKKQDISYYHEDVLRKEGYDKTPDFKLVVPILVDTHAIHWIESKALFGDHESHSGYLENQFWSYTNRFGPGLVIYWFGFIDELDINLERGVMLKDEFPTNLMTL 275
            Y+EI   +  +   R + +  LK +FPS S  T  SI+SQ YQ+  K+   KHH    I  Y Q+Y   +        +  LA  VD+ P+L+AR+ILE   +E+     +K+ I   ++   +IPD +L+ +V  CI ND   GP+++ +KH IG ++E +L D L ++++S+  ED LR +GYDKTPDF L VP+ V+ H IHWIESKA FGD  SH  YL +QFWSY NRFGPGLVIYW+GFI ELD N ERG++LK  FPTN++TL
Sbjct:    8 YDEIAQCLVSVPPTR-QSLRKLKQRFPSQSQATLLSIFSQEYQKHIKRTHAKHHTSEAIESYYQRYLNGVVKNGAAPVLLDLANEVDYAPSLMARLILERFLQEHEETPPSKSIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIGHEHEVLLRDLLLEKNLSFLDEDQLRAKGYDKTPDFILQVPVAVEGHIIHWIESKASFGDECSHHAYLHDQFWSYWNRFGPGLVIYWYGFIQELDCNRERGILLKACFPTNIVTL 276

The following BLAST results are available for this feature:

BLAST of TCONS_00058867-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058867-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CO041	6.190e-84	46.30	Uncharacterized protein C15orf41 OS=Homo sapiens G...	[more]

You are here

TCONS_00058867-protein (polypeptide) - C. hemisphaerica