TCONS_00058966-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058966-protein
Unique NameTCONS_00058966-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058966-protein ID=TCONS_00058966-protein|Name=TCONS_00058966-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MYALSGVPPERQKIMAKGKALKPNTWDGFALKNGMMLLMMGSADALPEAP
KTKTQFIEDMSDAQVAKATNLPTGLNNLGNTCYMNATIQCLKTVPELVDG
LKSYSGQISIGGVLSDTASAITTSLRDLYSSLDRSNTDSLPPIMFLQVFM
SLKREKRIEHSELFGMGPIPG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037143XLOC_037143Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058966TCONS_00058966Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 59..161
e-value: 1.3E-18
score: 66.2
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 69..152
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 73..154
e-value: 6.3E-13
score: 48.7
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 74..89
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 73..171
score: 10.534
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 2..60

Blast
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BLAST of TCONS_00058966-protein vs. Swiss-Prot (Human)
Match: UBP14 (Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 6.504e-54
Identity = 82/147 (55.78%), Postives = 110/147 (74.83%), Query Frame = 0 
Query:    1 MYALSGVPPERQKIMAKGKALKPNTWDGFALKNGMMLLMMGSADALPEAPKTKTQFIEDMSDAQVAKATNLPTGLNNLGNTCYMNATIQCLKTVPELVDGLKSYSGQISIGGVLSDTASAITTSLRDLYSSLDRSNTDSLPPIMFLQ 147
            ++AL+GV P RQK+M KG  LK + W    +KNGM LLMMGSADALPE P  KT F+EDM++ Q+A A  LP GL NLGNTCYMNAT+QC+++VPEL D LK Y+G +   G ++ +A  IT +LRDL+ S+D++++ S+PPI+ LQ
Sbjct:   33 LFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMA-SAQYITAALRDLFDSMDKTSS-SIPPIILLQ 177
The following BLAST results are available for this feature:
BLAST of TCONS_00058966-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP146.504e-5455.78Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo s... [more]
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