TCONS_00059074-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059074-protein
Unique Name	TCONS_00059074-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	137

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059074-protein ID=TCONS_00059074-protein|Name=TCONS_00059074-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MSHFSEIIYKKSEMVDRIEFKELETEEVPVTSAVLLGAAHHLGTYCNKDF
TTFVQKRFETKDPRATLDEGKAVTNCALEFFRKLKAACNKEFTDHWTCLD
YNNQYYGQCRKTQKVYDECVLKNLGLESKQSDIYGKF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037203	XLOC_037203	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059074	TCONS_00059074	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010625	CHCH

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 88..122 e-value: 5.6E-7 score: 29.4

Blast

[Close]

BLAST of TCONS_00059074-protein vs. Swiss-Prot (Human)
Match: NDUA8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Homo sapiens GN=NDUFA8 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 2.020e-33
Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 0

Query:   14 MVDRIEFKELETEEVPVTSAVLLGAAHHLGTYCNKDFTTFVQKRFETKDPRATLDEGKAVTNCALEFFRKLKAACNKEFTDHWTCLDY-NNQYYGQCRKTQKVYDECVLKNLG 125
            +V+    +EL+ +EV ++SAVL  AAHH G  C+K    F+  R+E KDPR  L+EGK V  CAL+FFR++K  C + FT++WTC+DY   Q +  CRK Q  +DECVL  LG
Sbjct:    4 IVELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAEPFTEYWTCIDYTGQQLFRHCRKQQAKFDECVLDKLG 116

The following BLAST results are available for this feature:

BLAST of TCONS_00059074-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059074-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NDUA8	2.020e-33	48.67	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex...	[more]

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TCONS_00059074-protein (polypeptide) - C. hemisphaerica