TCONS_00059167-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059167-protein
Unique Name	TCONS_00059167-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	457

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059167-protein ID=TCONS_00059167-protein|Name=TCONS_00059167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
MDILEFINALKQKTGDDYFMHLEKLKSSPELIQETIDVLELKSDSDLANA
ICEALFVLYTDVGNESHKVCLQFIPAVIWAYYCQLSQKARGKPEALLLAF
YNKCVTRNVETPFTNSFRIPKLSKPSVFHEPMQLAASATLTENALNQHDK
SNKTIIFKGPTKRLDHIPSGMRNTVIATVLQEFNFSLSSYTKPTLLSLCH
LVFRLSICGYKQPEVSCPGISKENISSLFNKTKVRLSAKCVQELVTALQF
TSYNGLYEESKIVLDCLHQHSHYSLLYAGTLNTSALKNVLELSTSDKDFD
VCPPIDPRKCGYRVKGGKTSVMTPPRPSFVNSLSIDRTMEDSNASITQSK
SIASPSNVTIHIKTSSNNKTTVTAIPSIEIVSEGTDKTDGENDMENGHTP
NKRSSTYTDEDSEFENDKTPLIYCNSLSSDGSTTIVVLKSNPSSSSTSEK
SQQETPM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037264	XLOC_037264	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059167	TCONS_00059167	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018619	Hyccin

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018619	Hyccin	PFAM	PF09790	Hyccin	coord: 23..298 e-value: 3.2E-50 score: 170.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..457

Blast

[Close]

BLAST of TCONS_00059167-protein vs. Swiss-Prot (Human)
Match: HYCCI (Hyccin OS=Homo sapiens GN=FAM126A PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 4.811e-25
Identity = 74/245 (30.20%), Postives = 124/245 (50.61%), Query Frame = 0

Query:   25 LKSSPELIQETIDVLELKSDSDLANAICEALFVLYTDVGNESHKVCLQFIPAVIWAYYCQLSQK---ARGKPEALLLAFYNKCVTRNVETPFTNSFRIPKLSKPSVFHEPMQLAASATLTENALNQHDKSNKTIIFKGPTKRLDHIPSGMRNTVIATVLQEFNFSLSSYTKPTLLSLCHLVFRLSICGYKQPEV-SCPGISKENISSLFNKTKVRLSAKCVQELVTALQFTSYNGLYEESKIVLD 265
            LK    L+     V++ +  S+L   +C  LF  Y     +  +  LQF+P +IW Y    + +   + G  EALLL  YN  +          SF IP LSKPSV+HEP  + + A LTE+AL+QH  S   +++ GP  + + + +  R  V+  +L  +N +L+     +L SLC +  R+ +CGY +  V    GIS          +++ +S+  + +++T + F  YNG ++ ++  LD
Sbjct:   31 LKDKSSLVSSLYKVIQ-EPQSELLEPVCHQLFEFYRSGEEQLLQFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHTKVLSFTIPSLSKPSVYHEPSSIGSMA-LTESALSQHGLSK--VVYSGPHPQREMLTAQNRFEVLTFLLLCYNAALTYMPSVSLQSLCQICSRICVCGYPRQHVRKYKGIS----------SRIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALD 261

The following BLAST results are available for this feature:

BLAST of TCONS_00059167-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HYCCI	4.811e-25	30.20	Hyccin OS=Homo sapiens GN=FAM126A PE=1 SV=2	[more]

You are here

TCONS_00059167-protein (polypeptide) - C. hemisphaerica