TCONS_00059198-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059198-protein
Unique NameTCONS_00059198-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1203

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059198-protein ID=TCONS_00059198-protein|Name=TCONS_00059198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1203bp
MKIVLGILFVLCTCFDNVDACLRCDQDTWSKWTTTITCQEKDGDACNKVI
TLRRTKFFACRDSGCWREFKEEPCERCEQQCSRGVCSCDAGYKTDPANRL
NCLDVDECLTNNGGCQQTCNNTLGSFDCSCRKGYQVSTTDNKKCSPLLCP
TINHGVCPQDSYKDQGGVVCENVINQCTDNLFYKSQCDFKCRKGFGLAKI
SRIASRSNFAQYINESDFTSVFRSTTCDLDQYDKVKWSVDSTNDYYCRRL
NDAPRDLRLKKETIKEYDPPNKIAGNILSYDEQPNVKYSIENTASNMFYI
FGNEIKTSQTFKLKDMASNKIQVKIRATDSQEPKLYVEKTFEIDIQNVND
APVDIEISNTQFNDLTKVGDTVGLLTAKDYDDKPIVRSGNFKWTLLQNPG
NHFKIVNNALILEKLFQEKDKDFDVKIKIQCTDNDATDPKSSSIEITLFH
QNSNHPVKITSPNITIIAESTAPGTVVGQLQVADAEGDQLTITDLSDPKT
KAKFNLNDAKCSVKNGTNNCVSDIVLTSALDFEDTTSYIMKVGAVDEHKE
ESEIQFTLSVGNVDEKPVITFQQLSSVPETSSEGFLIGSISVTDPENNVK
SCSILDSQSPFNIRQYNIILKNKLNFEKKNSYVLNVECEDDTGLKSQSQA
TVYLEDINETPENPCAWATPPKIDPKTAIDDEVKDAILTSMDPDNLVERK
QAITYALKNAESVPFIIKDNKFFVSKELSPKEVYTLQVTVSDDGKLKKRD
SSNIFQNHQDTPVSKTYSCIITTKDSSPCKSYQVYKDRVCACPEPLTGFL
CDRDPSRCEPTNPCPSATICSKLVASPEKCIAKDYQLSMLLSISSNKLSD
AGYKHKLETYISDILNGDQGTKTLTNLDGSKRKRRSSTENNYYVQIGEFS
SPKGQSYIKFIPYNINNNYALTNNSKLCPKFENTDVRCVNKQDCAILETV
NEPCIPVKGGNVGTPPKVESPKDEPALYTYIVPILVVLVLAIVIVFLLYK
RRNRPIKKELDHPVVFNNFTNNLSTNENGGQTAEEIERNRRTVNINDFDN
QVFKPTNNSFVYDNPIHGLNQRIDPSTVNHRENRAFVEDPEQQTTDNKKP
DNGSIGNPLYASIGKSANNPLYQPSFKCKGKLTDQPTVVDLSEEEKAKNK
EYALVEDIIEAPSKPIRRGGSLNVYDPSMDDKTNNKDYKKSNIDDGDGGE
SNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037279XLOC_037279Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059198TCONS_00059198Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR013783Ig-like_fold
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR018097EGF_Ca-bd_CS
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinSMARTSM00112CA_2coord: 277..353
e-value: 0.22
score: 10.4
coord: 590..662
e-value: 1.6E-5
score: 34.4
coord: 490..568
e-value: 0.16
score: 12.1
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 104..145
e-value: 1.7E-8
score: 44.2
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 104..144
e-value: 5.5E-8
score: 32.8
IPR000742EGF-like domainSMARTSM00181egf_5coord: 59..103
e-value: 160.0
score: 2.2
coord: 107..145
e-value: 0.026
score: 23.7
coord: 768..809
e-value: 160.0
score: 2.3
NoneNo IPR availableGENE3D2.60.40.60coord: 459..555
e-value: 1.5E-7
score: 31.4
NoneNo IPR availableGENE3D2.10.25.10coord: 131..199
e-value: 0.0036
score: 16.6
NoneNo IPR availableGENE3D2.10.25.10coord: 110..130
e-value: 3.8E-11
score: 42.4
NoneNo IPR availableGENE3D2.60.350.10coord: 239..350
e-value: 2.8E-8
score: 32.9
coord: 556..664
e-value: 3.7E-16
score: 58.6
coord: 351..458
e-value: 2.7E-9
score: 36.2
NoneNo IPR availableGENE3D2.40.155.10coord: 84..109
e-value: 5.2E-6
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1085..1112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1159..1203
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 459..569
score: 11.931
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 263..354
score: 9.015
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 576..673
score: 12.72
NoneNo IPR availableCDDcd00054EGF_CAcoord: 104..135
e-value: 1.42303E-5
score: 43.009
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 467..565
e-value: 7.55302E-6
score: 44.6118
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 576..659
e-value: 1.42369E-10
score: 58.8641
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 281..350
e-value: 4.08032E-4
score: 39.219
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 98..138
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 669..773
e-value: 0.58
score: 10.3
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 119..130
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 104..128
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 452..549
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 564..654

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059198-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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