TCONS_00059309-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059309-protein
Unique NameTCONS_00059309-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length254

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059309-protein ID=TCONS_00059309-protein|Name=TCONS_00059309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MVVAGNYMEEDCGNDPHYLFPFQEIDEIEQITVKRPNCLRCKRPERVCVC
FAFPKVPVPITTTLHILQHPREQDFRQLTTVPLLQECIPKDKCVIYRGKR
FPKSKFAKLHEVCAQTNTAVLYPAKDAVDIKDFVAQLDGEPLQLIVLDGT
WQEARAIGHNCSALLKGIPKVKITGSWRSEFVIKTQPTDESVSTLEAVAI
ALSQIEQIPDFITIARKPLKALCDFQIQHGAQIHESKESLARKGIKYRIF
EKKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037352XLOC_037352Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059309TCONS_00059309Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005636DTWSMARTSM01144DTW_2acoord: 34..231
e-value: 4.5E-46
score: 169.1
IPR005636DTWPFAMPF03942DTWcoord: 35..210
e-value: 3.2E-36
score: 124.8

Blast
[Close]
BLAST of TCONS_00059309-protein vs. Swiss-Prot (Human)
Match: DTWD2 (DTW domain-containing protein 2 OS=Homo sapiens GN=DTWD2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.575e-54
Identity = 87/212 (41.04%), Postives = 139/212 (65.57%), Query Frame = 0 
Query:   34 KRPNCLRCKRPERVCVCFAFPKVPVPITTTLHILQHPREQDFRQLTTVPLLQECIPKDKCVIYRGKRFPKSKFAKLHEVCAQTNTAVLYPAKDAVDIKDFVAQLDGEPLQLIVLDGTWQEARAIGHNCSALLKGIPKVKITGSWRSEFVIKTQPTDESVSTLEAVAIALSQIEQIPDFITIARKPLKALCDFQIQHGAQIHESKESLARKGI 245
            +RP C RC RP++VC+C   P  P+ I+T L+I+QHP E++ + L TVPLL  C+P+DKC +  G+RF + +  +L  VC ++ T +LYP  +A ++++F+      P  +I++DGTW +A+ I +  ++L +   +V++  S  S++VI+ QPT+  +STLE  A+ALS +E+         +PL+ALC FQ+QHGAQI  SKE L + G+
Sbjct:   65 RRPECTRCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEEN-KVLRTVPLLAACLPQDKCKVKIGRRFSEERDPELSTVCRKSGTLILYPGAEAANLEEFILDSPVYPSTIIIIDGTWSQAKDIFYK-NSLFRHPKQVQLKTSISSQYVIRMQPTNRCLSTLECAAVALSILEKNNYIQETLLRPLQALCSFQLQHGAQIRLSKEHLLKNGL 274
The following BLAST results are available for this feature:
BLAST of TCONS_00059309-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DTWD21.575e-5441.04DTW domain-containing protein 2 OS=Homo sapiens GN... [more]
back to top