TCONS_00060110-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060110-protein
Unique NameTCONS_00060110-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060110-protein ID=TCONS_00060110-protein|Name=TCONS_00060110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
ASICKMPFHVDMIEFENHKYYVGTEKVTWSEAQALCHLRGAELVSFKDID
ESRFIHYEAVNKRGLEKFWIGYTDVVNEGTFKWTDHTEYGFTLFAAGEPN
NAGSEHCVYQRNTGYWNDANCGLKVGYVCKKPYFNPNGGGKSYRFFKEWR
NWDIAQQTCGHFGGNLVTIDSEAENEFLSQESLIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037819XLOC_037819Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060110TCONS_00060110Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 8..130
e-value: 1.5E-26
score: 104.2
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 26..131
e-value: 1.2E-20
score: 74.2
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 15..130
score: 21.991
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 3..135
e-value: 5.4E-34
score: 116.9
coord: 136..183
e-value: 2.8E-10
score: 39.6
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 107..129
NoneNo IPR availableCDDcd00037CLECTcoord: 20..131
e-value: 5.2769E-30
score: 106.935
NoneNo IPR availableCDDcd00037CLECTcoord: 143..180
e-value: 1.16829E-8
score: 48.7702
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 139..180
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 10..133

Blast
[Close]
BLAST of TCONS_00060110-protein vs. Swiss-Prot (Human)
Match: MRC1 (Macrophage mannose receptor 1 OS=Homo sapiens GN=MRC1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.696e-19
Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 0 
Query:   13 IEFENHKYYVGTEKVTWSEAQALCHLRGAELVSFKDIDESRFIHYEAVNKRGLEKFWIGYTDVVNEGTFKWTDHTEYGFTLFAAGEPNNAG-SEHCVYQ-RNTGYWNDANCGLKVGYVCKK-----------PYFN--PNGGGKSYRFF------------KEWRNWDIAQQTCGHFGGNLVTIDSEAENEFLS 179
            + +++++YY   EK T   A+A C     +LVS +   E +F+ ++ VN+   +  +     +  +  F W D ++  +  +A GEPN A   E+CV    N+G+WND NCG    ++C++           P     P+G  + + F+            +E +NW  A++ C  FGGNLV+I +E E  FL+
Sbjct:  805 VIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFL-WKYVNRNDAQSAYFIGLLISLDKKFAWMDGSKVDYVSWATGEPNFANEDENCVTMYSNSGFWNDINCGYPNAFICQRHNSSINATTVMPTMPSVPSGCKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLT 997
The following BLAST results are available for this feature:
BLAST of TCONS_00060110-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRC12.696e-1928.87Macrophage mannose receptor 1 OS=Homo sapiens GN=M... [more]
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