TCONS_00060581-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060581-protein
Unique NameTCONS_00060581-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060581-protein ID=TCONS_00060581-protein|Name=TCONS_00060581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MGTSYLSSSLLFTVGDTRCCLWNTFDPQGKPICSLQQHTWSYEVECLALS
PDRTLLATGSVDKQITLSTVEVSDEFSHGLHDDSNELPYAKLPAKTATSM
QEVKNDKSSADYLDDAVYLNVAREKEDGLRVAKQTIRIKAPVTSEILQNK
LSNLKVVDNNGTEHQRTNAANLFRRLSMRAEGDSKENPKSKELVEERKKN
GPRVKPSTASVKRRKPANSKTLDNGFLSELEGKFTVSPPSSSHLGYDDNL
SCHSNSDVSSFYSNDDEYCDIEVVTSEMIRLATEEEAHKM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038106XLOC_038106Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060581TCONS_00060581Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 28..69
e-value: 0.0017
score: 27.6
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 3..265
e-value: 7.8E-9
score: 34.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..224
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 8..68

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060581-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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