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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060642-protein ID=TCONS_00060642-protein|Name=TCONS_00060642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MASDQETDAEMIKECEDYVSKHNIQVLLKDAIVQICINKPDKPYKFLREH
FEKLEKEEAKSLGVDEPEAVIQGPPPSATQRRRRGAVSAAVISEEDAASY
VKKVIPKDYKTMAALSKAIEKNVLFSHLDDSERSDIFDAMFMVKHSEGEV
IINQGDEGDNFYIIDHGDVEVYVNDQLVVSISPGGSFGELALIYGTPRAA
TVKAKTDVKLWAIDRVTYRRILMGSTMRKRKMYEQFLEKVSILESLDKWE
RLTVCDALEPCSFDDGEEIVIQGQPGDDFFIIVEGTATVLQRRTETDDPI
EVSRLGLSDYFGEIALVLNRPRAATVVAQGQLKCVKLDRQRFERVLGPCV
DILRRNIQQYNSFVSLVV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005952 | cAMP-dependent protein kinase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001932 | regulation of protein phosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008603 | cAMP-dependent protein kinase regulator activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0001932 |
regulation of protein phosphorylation |
| cellular_component |
GO:0005952 |
cAMP-dependent protein kinase complex |
| molecular_function |
GO:0008603 |
cAMP-dependent protein kinase regulator activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00103 | CAMPKINASE | coord: 309..318
score: 71.67
coord: 342..354
score: 65.38
coord: 160..174
score: 53.78
coord: 321..332
score: 62.5
coord: 145..159
score: 53.11 |
| None | No IPR available | GENE3D | 1.20.890.10 | | coord: 12..56
e-value: 1.1E-17
score: 63.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 64..83 |
| None | No IPR available | CDD | cd00038 | CAP_ED | coord: 242..357
e-value: 2.4809E-27
score: 103.175 |
| None | No IPR available | CDD | cd12097 | DD_RI_PKA | coord: 15..58
e-value: 1.47337E-24
score: 93.4887 |
| None | No IPR available | CDD | cd00038 | CAP_ED | coord: 124..233
e-value: 2.47999E-31
score: 114.345 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | SMART | SM00394 | akam_3 | coord: 22..59
e-value: 1.9E-10
score: 50.7 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | PFAM | PF02197 | RIIa | coord: 22..59
e-value: 1.5E-11
score: 43.7 |
| IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | SUPERFAMILY | 47391 | Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit | coord: 13..59 |
| IPR000595 | Cyclic nucleotide-binding domain | SMART | SM00100 | cnmp_10 | coord: 124..240
e-value: 4.2E-30
score: 116.0
coord: 242..361
e-value: 1.1E-28
score: 111.3 |
| IPR000595 | Cyclic nucleotide-binding domain | PFAM | PF00027 | cNMP_binding | coord: 262..346
e-value: 1.5E-16
score: 60.1
coord: 145..223
e-value: 3.7E-20
score: 71.6 |
| IPR000595 | Cyclic nucleotide-binding domain | PROSITE | PS50042 | CNMP_BINDING_3 | coord: 242..363
score: 39.256 |
| IPR000595 | Cyclic nucleotide-binding domain | PROSITE | PS50042 | CNMP_BINDING_3 | coord: 124..239
score: 44.572 |
| IPR014710 | RmlC-like jelly roll fold | GENE3D | 2.60.120.10 | | coord: 234..367
e-value: 3.6E-31
score: 107.3 |
| IPR014710 | RmlC-like jelly roll fold | GENE3D | 2.60.120.10 | | coord: 103..233
e-value: 3.4E-36
score: 123.5 |
| IPR012198 | cAMP-dependent protein kinase regulatory subunit | PIRSF | PIRSF000548 | PK_regulatory | coord: 3..368
e-value: 2.0E-123
score: 410.6 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00888 | CNMP_BINDING_1 | coord: 151..167 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00889 | CNMP_BINDING_2 | coord: 187..204 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00889 | CNMP_BINDING_2 | coord: 311..328 |
| IPR018488 | Cyclic nucleotide-binding, conserved site | PROSITE | PS00888 | CNMP_BINDING_1 | coord: 269..285 |
| IPR018490 | Cyclic nucleotide-binding-like | SUPERFAMILY | 51206 | cAMP-binding domain-like | coord: 235..360 |
| IPR018490 | Cyclic nucleotide-binding-like | SUPERFAMILY | 51206 | cAMP-binding domain-like | coord: 105..230 |
Blast
BLAST of TCONS_00060642-protein vs. Swiss-Prot (Human)
Match: KAP0 (cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Homo sapiens GN=PRKAR1A PE=1 SV=1) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 265/371 (71.43%), Postives = 309/371 (83.29%), Query Frame = 0
Query: 8 DAEMIKECEDYVSKHNIQVLLKDAIVQICINKPDKPYKFLREHFEKLEKEEAKSLG--------VDEPEAVIQGPPPSAT--QRRRRGAVSAAVISEEDAASYVKKVIPKDYKTMAALSKAIEKNVLFSHLDDSERSDIFDAMFMVKHSEGEVIINQGDEGDNFYIIDHGDVEVYVNDQLVVSISPGGSFGELALIYGTPRAATVKAKTDVKLWAIDRVTYRRILMGSTMRKRKMYEQFLEKVSILESLDKWERLTVCDALEPCSFDDGEEIVIQGQPGDDFFIIVEGTATVLQRRTETDDPIEVSRLGLSDYFGEIALVLNRPRAATVVAQGQLKCVKLDRQRFERVLGPCVDILRRNIQQYNSFVSLVV 368
+A ++ECE YV KHNIQ LLKD+IVQ+C +P++P FLRE+FE+LEKEEAK + D E I PPP+ RRRRGA+SA V +EEDAASYV+KVIPKDYKTMAAL+KAIEKNVLFSHLDD+ERSDIFDAMF V GE +I QGDEGDNFY+ID G+ +VYVN++ S+ GGSFGELALIYGTPRAATVKAKT+VKLW IDR +YRRILMGST+RKRKMYE+FL KVSILESLDKWERLTV DALEP F+DG++IV+QG+PGD+FFII+EG+A VLQRR+E ++ +EV RLG SDYFGEIAL++NRPRAATVVA+G LKCVKLDR RFERVLGPC DIL+RNIQQYNSFVSL V
Sbjct: 11 EARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKEEAKQIQNLQKAGTRTDSREDEISPPPPNPVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFSVSFIAGETVIQQGDEGDNFYVIDQGETDVYVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQYNSFVSLSV 381
The following BLAST results are available for this feature:
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