TCONS_00060830-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060830-protein
Unique NameTCONS_00060830-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length481

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060830-protein ID=TCONS_00060830-protein|Name=TCONS_00060830-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MGIGTKTCKSCNKTVASAKKVCDCGHVFLEKKKRGFQESPIVITSDRLRS
SREPDEDDGRPIRAKKHKYQDSDFIYSAGTSTSTKPQQAESGESTLNKTT
YYQGEKLYPKRDRTKTSKFEKLFSNNLKQSDAQLQLSGDNNSIQEAEQSN
AIDGGETGARKFDTFARKTFTGVDNMLREIGSDGEFSGTKLDRINNENEI
DGGSTTLESEEILELSSDELLLQNIEACIEIVKDESKKIPLPTLSELSQD
SSNSESEDIVEDDVCLTRVKIPKYIRKLMIKSRAELREDDDDVPLSHLMK
NGPFLSGATIKDGKLKRPVGRPRKYPIVVDKIKRPVGRPRKEKTENKIEA
KIGQPPKKKRGRPATAVPPLYGFFHDPYAALFDDDDDNDRDPDYKSPTKT
LTSPMGNRSLERSVKRNFLSPNNMMSERMYQEIYQMDAGEDQHWVSQQSR
VPAEKKELYSHILEEINRRIVSQQAFFVSLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038200XLOC_038200Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060830TCONS_00060830Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifPRINTSPR00929ATHOOKcoord: 355..365
score: 48.11
coord: 316..326
score: 57.58
coord: 331..342
score: 46.53
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 357..369
e-value: 17.0
score: 8.3
coord: 316..328
e-value: 17.0
score: 8.3
coord: 333..345
e-value: 1.9
score: 13.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..406

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060830-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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