TCONS_00061014-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061014-protein
Unique NameTCONS_00061014-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061014-protein ID=TCONS_00061014-protein|Name=TCONS_00061014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=660bp
MPKSKKKSNKETKEKDGDSEKPLPKLVLKVAKEHKKHHKKLEGEGADNTE
RGGEHSHHKKKKKKHHKHQDRDKDQEKEKEKKSRKREHSVAETTQNEPPV
KKLRNKDKEKKADKVDKEIPPFRLCLENLLRNLQRKDVYNIFQFPVSDAV
APGYSKVIKKPMDFMTMSQKIEKDEYTSIEEMKADFLLMCSNAMLYNGPD
TIYYKSADKMLSIGLKTLSKEKMHKVSKSLGLAVSDSEDDVVHVEDTDVN
VLDSVNTEEESPAPKQRKSERKKKSKEKDREHKNMLESILAASHAARQKL
LQKYPDQLYGYISKDKASGNQSFNILNPDATEDTRTREVTLGNVAPPPQA
GIPAGQVTKEDKKNRVVPVNYLLYGPFGSFGPSYDSSLSNTTKEESDLLL
QTYGSDLGVSYRNSVHEFTNEASCLTGFVDRLLDTITNGAHSKFVKKQKE
AEQEEANKENKERTVLKKKAISETQTNTTTTLPTPPTSNANSSQPSASSN
VETTPEVDLESLLTLDDLGIDVSFIKDIVGNKEDSKKQTDEKPSDSNVST
KFSAEDVLTKNAELLDSLQKKQNARLSSKYGGTQPIDAEELNIATSLTNN
LKEIMKVTKPVDVVPTDAVKRAIGSENYVPEEQKAEAETTPSITENQQQG
KTTEAVQAIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038299XLOC_038299Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061014TCONS_00061014Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR021900DUF3512
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..282
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 151..167
score: 47.19
coord: 185..204
score: 39.35
coord: 167..185
score: 25.17
IPR001487BromodomainSMARTSM00297bromo_6coord: 115..223
e-value: 5.7E-30
score: 115.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 126..209
e-value: 2.7E-24
score: 84.9
IPR001487BromodomainGENE3D1.20.920.10coord: 89..230
e-value: 4.0E-35
score: 120.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 134..204
score: 16.942
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 99..220
IPR021900Protein of unknown function DUF3512PFAMPF12024DUF3512coord: 265..524
e-value: 2.1E-49
score: 168.0

Blast
BLAST of TCONS_00061014-protein vs. Swiss-Prot (Human)
Match: BRD7 (Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.916e-68
Identity = 190/602 (31.56%), Postives = 292/602 (48.50%), Query Frame = 0
Query:   52 GGEHSHHKKKKKKHHKHQDRDK-DQEKEKEKKSRKREHSVAETTQNEPPVKKLRNKDKEKKADKVDKEIPPFRLCLENLLRNLQRKDVYNIFQFPVSDAVAPGYSKVIKKPMDFMTMSQKIEKDEYTSIEEMKADFLLMCSNAMLYNGPDTIYYKSADKMLSIGLKTLSKEKMHKVSKSLGLAVSDSEDDVVHVEDTDVNVLDSVNTEEESPAPKQRKSER-------KKKSKEKDREHKNMLESILAASHAAR-QKLLQKYPDQLYGYISKDKASGNQSFNILNPDATE--------DTRTRE-----VTLGNVAPPPQAGIPAGQVTKEDKKNRVVPVNYLLYGPFGSFGPSYDSSLSNTTKEESDLLLQTYGSDLGVSYRNSVHEFTNEASCL---TGFVDRLLDTITNGAHSKFVKKQKEAEQEEANKENKERTVLKKKAISETQTNTTTTLPTPPTSNANSSQPSASSNVETTPEVDLESLLTLDDLGIDVSFIKDIVGNKEDSKKQTDEKPSDSNVSTKFSAEDVLTKNAELLDSLQKKQNARLSSKYGGTQPI----DAEELNIATSLTNNLKEIMKVTKPVDVVPTDAVKRAIG 624
            G E    +++ K+  K +DRD+ + E EK+ +        A    + PP K L +      A + + E  P +  L  L+R LQRKD    F FPV+D +APGYS +IK PMDF TM +KI+ ++Y SIEE+K +F LMC+NAM+YN P+TIYYK+A K+L  G+K LS+E++  + +S+   ++D +      + TD     S + E+     ++R+          K  SKE  ++ K+MLE    +++  R Q+ L +   +  G +++   +    F    PD T         D    E     V LG      Q+G+   Q  KEDK+N+V PV YL YGP+ S+ P YDS+ +N +K++SDL+  TYG D  +    S+HEF   A+C        D LLD +T G HS+ +   +E E      E   RT+   K +  T+         PP    +S+Q              L +L  + + G+ V                      DS  +  F  +  L +   LL  LQ+ QN RLS++              E+++A  +TNNLKE+ +   P D+V T  V++A+G
Sbjct:   75 GEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCH------APVRLDLPPEKPLTSS----LAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDF-MADLQKTRKQKDGTDT----SQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDKFKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPIVGEPGYCPVRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFL--ATCQDYPYVMADSLLDVLTKGGHSRTL---QEMEMSLPEDEGHTRTLDTAKEMEITEVE-------PPGRLDSSTQDR------------LIALKAVTNFGVPVEVF-------------------DSEEAEIFQKK--LDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQVTPGDIVSTYGVRKAMG 616          
The following BLAST results are available for this feature:
BLAST of TCONS_00061014-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BRD75.916e-6831.56Bromodomain-containing protein 7 OS=Homo sapiens G... [more]
back to top