TCONS_00061068-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061068-protein
Unique NameTCONS_00061068-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length425

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061068-protein ID=TCONS_00061068-protein|Name=TCONS_00061068-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MAKSPQTMAIEISTLFNKTRFKPSSAASYLVFFFYMPLGIVLFLLRILLS
FQFAIVLAILPKEWFIRRIILRVFLFCMGIFVSCSGTQHQKKKAKVLISN
HISLLDVLSIDSICSSKLSTKYKDINSTLNWLFSMSKSANDDISLPTLIF
PEEGTTNGNVALMKFSSKELKNNESVPLQPMVLTAYRSWFTPVHLNCLES
TLVEDLLWCLYTPFTMYTICFLPVREIPNEEGLDDFAKSLQKDMAYVLDK
KVTNFTAADKNEYIKRLKDEEKRREQQRLSNTNPFPEQSYRAPPTTVSST
TSQTKAQLEALKMIEQIKNVLPQVPVKIIKNELESTKNVDLTIAHLLDGS
IQYTPLSDEDQQKENKDIELKRKSIIQKANDAAKKAASATTPTSWKDRQL
SFQEKKKIMIENARIKYLELHPEYA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038328XLOC_038328Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061068TCONS_00061068Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..280
NoneNo IPR availableGENE3D3.40.1130.10coord: 59..140
e-value: 0.14
score: 10.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..300
IPR003892Ubiquitin system component CueSMARTSM00546cue_7coord: 309..350
e-value: 1.6E-6
score: 37.7
IPR003892Ubiquitin system component CuePFAMPF02845CUEcoord: 313..350
e-value: 3.1E-5
score: 23.5
IPR003892Ubiquitin system component CuePROSITEPS51140CUEcoord: 309..351
score: 13.526

Blast
[Close]
BLAST of TCONS_00061068-protein vs. Swiss-Prot (Human)
Match: AUP1 (Ancient ubiquitous protein 1 OS=Homo sapiens GN=AUP1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.936e-24
Identity = 84/269 (31.23%), Postives = 128/269 (47.58%), Query Frame = 0 
Query:  152 EEGTTNGNVALMKFSSKELKNNESVPLQPMVLTAYRSWFTPVHLNCLESTLVEDLLWCLYTPFTMYTICFL-PVREIPNEEGLDDFAKSLQKDMAYVLDKKVTNFTAADKNEYIKRLKDEEKRREQQRLSNTNPFPEQSYRAPPTTVSSTTSQTKAQLEALKMIEQIKNVLPQVPVKIIKNELESTKNVDLTIAHLLDGSIQYTPLSDEDQQKENKDIELKRKSIIQKANDAAKKAASATTPTSWKDRQLSFQEKKKIMIENARIKYLE 419
            EE  TNG   L++FSS      + V  QP+ L   R     V +   +++ V +LLW L+ PFT+Y + +L PV     E   ++FA  +Q+ +A  L +  T  T ADK E++KR          QR     P   QS     +   S       QL  L   +++K VLP VP+ +I+ +L  T  VDLTI +LL+G++ + P   ED  K  + +     S    +     +  + T   S   RQ S QE+K+ + E AR ++ E
Sbjct:  227 EEEATNGREGLLRFSSWPFSIQDVV--QPLTLQVQRPL---VSVTVSDASWVSELLWSLFVPFTVYQVRWLRPVHRQLGEAN-EEFALRVQQLVAKELGQTGTRLTPADKAEHMKR----------QRHPRLRPQSAQS-----SFPPSPGPSPDVQLATLA--QRVKEVLPHVPLGVIQRDLAKTGCVDLTITNLLEGAVAFMP---EDITKGTQSLPTASASKFPSSGPVTPQPTALTFAKSSWARQESLQERKQALYEYARRRFTE 469
The following BLAST results are available for this feature:
BLAST of TCONS_00061068-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AUP16.936e-2431.23Ancient ubiquitous protein 1 OS=Homo sapiens GN=AU... [more]
back to top