TCONS_00061181-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061181-protein
Unique Name	TCONS_00061181-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	473

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061181-protein ID=TCONS_00061181-protein|Name=TCONS_00061181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
MFRRELWRGTLRHQKTSKQIWWMTCRNLQQESWVKWLYDNDENLDKLKGG
MKASLLTKRNHQKGDLIPYTFAQDFVSHYGTLKNMENKSRFFQLLSEKLG
CNNEDIQNNMKLLKESMDTRDKLTHRHRHQLSASLTPTYKQLFDDVSKLE
DGVGFLVDMRKDLLFSQRKGFVPKTLELQTFDTFLKEHLAQWFAGGFLDL
HQVTWDETSADLMEKLMKYEAVHPIVNWNDLKKRAAVGRRIFMFSHRLMP
GEPLVVLYVLLGNHIPNNIQNVLSSEQSVEDKEEITTATFYSISSTQRGL
DGIGLGNVLIKRVVEELRREFHNMKTFVTLSPIPGFKRWLDQQIKNHKEG
VSSRYGDLLESSAMEHLRDDGWVKDMKKCNQLQPVLQSLCARYLLHEKRR
GFAMDPVANFHLRNGASLWRINWLANTEPRGLKSSHTLMVNYRYDLSQIE
TNNLKYVMGGEITASESVLEIVS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038375	XLOC_038375	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061181	TCONS_00061181	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007956	Malonyl_CoA_deC_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0050080	malonyl-CoA decarboxylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
molecular_function	GO:0050080	malonyl-CoA decarboxylase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17408	MCD_N	coord: 101..193 e-value: 9.3E-12 score: 44.8
IPR007956	Malonyl-CoA decarboxylase, C-terminal	PFAM	PF05292	MCD	coord: 196..445 e-value: 1.3E-93 score: 313.3

Blast

[Close]

BLAST of TCONS_00061181-protein vs. Swiss-Prot (Human)
Match: DCMC (Malonyl-CoA decarboxylase, mitochondrial OS=Homo sapiens GN=MLYCD PE=1 SV=3)

HSP 1 Score: 298.13 bits (762), Expect = 6.424e-96
Identity = 169/418 (40.43%), Postives = 240/418 (57.42%), Query Frame = 0

Query:   74 DFVSHYGTLKNMENKSRFFQLLSEKLGCNNEDI-QNNMKLLKESMDTRDK-LTHRHRHQLSASLTPTYKQLFDDVSKLEDGVGFLVDMRKDLLFSQRKGFVPKTLELQTFDTFLKEHLAQWFAGGFLDLHQVTWDETSADLMEKLMKYEAVHPIVNWNDLKKRAAVGRRIFMFSHRLMPGEPLVVLYVLLGNHIPNNIQNVLS--SEQSVEDKEEITTATFYSISSTQRGLDGIGLGNVLIKRVVEELRREFHNMKTFVTLSPIPGFKRWL----DQQIKNHKEG----------VSSRYGDLLESSAMEHLRDDGWVKDMKKCNQLQPVLQSLCARYLLHEKRRGFAMDPVANFHLRNGASLWRINWLANTEPRGLKSSHTLMVNYRYDLSQIETNNLKYVMGGEITASESVLEIVS 473
            DFVS YG L     ++     L+   G ++  + + +  +L      R+  +  +   +L  +L P Y+ LF  +SKL+ GV FLV +R DLL +Q    V +  +++  +  LK  L++WF+ GFL+L +VTW  +  ++++K+ + EAVHP+ NW D+K+R    RR + FSH   PGEPLVVL+V L   I +NIQ ++        E+K +IT A FYSIS TQ+GL G+ LG  LIKRVV+EL+REF ++  F +LSPIPGF +WL    + Q K H             +S   G  +  +    L    WV+  K    LQ  L  LCA YL  EK RG+A++PVANFHL+NGA LWRINW+A+   RG+  S  LM NYRY L +   N+  Y+    I ASE VL +V+
Sbjct:   70 DFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAEQSAGVLHLRQQQREAAVLLQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLV-EGPDVREMNGVLKGMLSEWFSSGFLNLERVTW-HSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQGVELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSECKEISEITGGPINETLKLLLSSSEWVQSEKLVRALQTPLMRLCAWYLYGEKHRGYALNPVANFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYFLEETGPNSTSYLGSKIIKASEQVLSLVA 485

The following BLAST results are available for this feature:

BLAST of TCONS_00061181-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061181-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DCMC	6.424e-96	40.43	Malonyl-CoA decarboxylase, mitochondrial OS=Homo s...	[more]

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TCONS_00061181-protein (polypeptide) - C. hemisphaerica