TCONS_00061192-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061192-protein
Unique NameTCONS_00061192-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061192-protein ID=TCONS_00061192-protein|Name=TCONS_00061192-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
IVGGNLPLISQTRNATKKAGGSVKRQNHNRKRKGKRYGPKVDQGELVQPG
AILFRQKGFRMHPGRNVDYGKDHTLFALREGNVAITKELVERPQWFKWGE
GPYFERTFIHVEERPKVRRIICKNPESLAKFYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038382XLOC_038382Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061192TCONS_00061192Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 70..94
score: 38.15
coord: 45..69
score: 43.85
coord: 20..44
score: 23.85
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 15..87
e-value: 8.3E-24
score: 83.3
IPR001684Ribosomal protein L27PRODOMPD003114coord: 44..84
e-value: 7.0E-9
score: 139.0
NoneNo IPR availableGENE3D2.40.50.100coord: 36..114
e-value: 2.4E-22
score: 78.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..41
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 15..96

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061192-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top