TCONS_00061310-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061310-protein
Unique NameTCONS_00061310-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061310-protein ID=TCONS_00061310-protein|Name=TCONS_00061310-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MLMYCRNHLSRLKLSNKVIISSPQCGCSTEVSPPLKKKRKLIYAKGKTFV
DWKRIYIKSGNGGNGSASFVHSRDHKGGPDGGDGGRGADVIFIADDAYSQ
LSHLEHQYRAKNGGNGSKKNRHGKNGEHLHIQIPVGTVITNSNSDEELAD
LTRKGETYTVAKGGSKGLGNVHFKSPTRVRPREFTEGGAGEEIFVELELK
SIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDL
TVSVADIPGIVKGAHENIGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFE
ILKTELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLS
AKFSQNIEELKSLILQKWKFKHTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038465XLOC_038465Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061310TCONS_00061310Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR014100GTP-bd_Obg/CgtA
IPR035101GTP-bd_Obg
IPR006169GTP1_OBG_dom
IPR005225Small_GTP-bd_dom
IPR031167G_OBG
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0000287magnesium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0000287 magnesium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 226..244
score: 45.83
coord: 271..289
score: 32.85
coord: 254..269
score: 48.49
coord: 205..225
score: 50.99
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 204..306
e-value: 5.9E-22
score: 77.8
IPR014100GTP-binding protein Obg/CgtATIGRFAMTIGR02729TIGR02729coord: 49..366
e-value: 1.6E-111
score: 370.4
IPR014100GTP-binding protein Obg/CgtAHAMAPMF_01454GTPase_Obgcoord: 48..369
score: 37.961
IPR035101GTP-binding protein, Obg-typePIRSFPIRSF002401GTP-binding_obgcoord: 46..373
e-value: 1.4E-120
score: 400.6
NoneNo IPR availableGENE3D3.40.50.300coord: 202..372
e-value: 3.6E-35
score: 120.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
IPR006169GTP1/OBG domainPFAMPF01018GTP1_OBGcoord: 50..200
e-value: 1.0E-47
score: 161.5
IPR006169GTP1/OBG domainGENE3D2.70.210.12coord: 48..199
e-value: 6.2E-48
score: 161.8
IPR006169GTP1/OBG domainSUPERFAMILY82051Obg GTP-binding protein N-terminal domaincoord: 49..200
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 203..363
e-value: 3.7E-12
score: 44.3
IPR031167OBG-type guanine nucleotide-binding (G) domainPROSITEPS51710G_OBGcoord: 203..369
score: 63.209
IPR031167OBG-type guanine nucleotide-binding (G) domainCDDcd01898Obgcoord: 203..367
e-value: 2.76966E-75
score: 231.93
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 204..368

Blast
[Close]
BLAST of TCONS_00061310-protein vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.880e-71
Identity = 139/316 (43.99%), Postives = 202/316 (63.92%), Query Frame = 0 
Query:   47 KTFVDWKRIYIKSGNGGNGSASFVHSRDHK--GGPDGGDGGRGADVIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHLHIQIPVGTVITNSNSDEELADLTRKGETYTVAKGGSKGLGNVHFKSPTRVRPREFTEGGAGEEIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENIGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKTELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFSQNIEEL 360
            + FVD++R+ +  GNGG G++ F HS   K  GGPDGGDGG G  VI   D     LS +  +Y+  +G +G  KN  G++G  L+I++PVGT++        +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCF-HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00061310-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG22.880e-7143.99Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
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