TCONS_00061441-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061441-protein
Unique NameTCONS_00061441-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length693

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061441-protein ID=TCONS_00061441-protein|Name=TCONS_00061441-protein|organism=Clytia hemisphaerica|type=polypeptide|length=693bp
MFTRLQIFIVLFLVLIGLSMSHDHERDDMIGLDKSRDEDVDDELDKDGGI
FKVKDKSAHRNIHDPWDNLDLDELAPVQNGKNVQKRDNSQPTGQENAGST
TGQWDKEVNSLASELRDCKKTTSKILKERLEVCQTKLNKTVHQMKEFQER
LSNSDQYTTMESLPYFKQFVREFKEKMKPLEGEENKYGIELMMFRSDYEQ
LEHLLQDDQRPPDNKQLLDLIVQAFKPLSRSSYVCIKPYMNARTAAIVVI
TLLILYIIHHVVSIPQSMMGRLTFLFFVVFVISVCWEYYRMYKMALAKKT
ASTMQLPKPPEQCLPVEKISELDALLIWFKDRFTLADDECVKYHENLLVD
PFWEVSPMMAISVCLARFFLEPLKLCASAFGESFRLLFKEIPIQWQPFVF
ITLVLLTSLVILTHAGLEIWTPLIRLGFRPRKNDNTLALENENRQLRHDN
DRLRLELDRRPALPPPPAPAAQGVQGVEEVGVIPNLVLPAQNFIRPVINQ
SGEGVNAPVLALDNALNLSRDQNAQPGQNIVIAQPVEEFGGRNRANNSPS
SPIQEEPGNETLPDVMLLSGSSGVVDVENFHSLPSSTEEMMSANATSLPE
EVDPSASNNAVVGDGRGINAPNQTISSQSESRNEQFEMVDNANVENFEEE
LLGANATSVVNDRALNAGQIEGQSEEVHQQQRLPVENSDHVVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038543XLOC_038543Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061441TCONS_00061441Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009231Chloride_chnl_CLIC-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 436..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..105
IPR009231Chloride channel CLIC-likePFAMPF05934MCLCcoord: 126..449
e-value: 5.5E-25
score: 88.0

Blast
[Close]
BLAST of TCONS_00061441-protein vs. Swiss-Prot (Human)
Match: CLCC1 (Chloride channel CLIC-like protein 1 OS=Homo sapiens GN=CLCC1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.169e-17
Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = 0 
Query:  271 RLTFLFFVVFVISVCWEYYRMYKMALAKKTASTMQLPKPPEQCLPVEKISELDALLIWFKDRFTLADDECVKYHENLLVDPFWEVSPMMAISVCLARFFLEPLKLCASAFGESFRLLFKEIPIQWQPFVFITLVLLTSLVILT 413
            +L  +  + F+ S+ W +  +YK+A A+  A   ++   P   +  +K+    ++  WF+  +T  DD C KY+E LLV+P W V P  A++V    F  EPLK      GE  + L KEIP      + + ++++ +L IL+
Sbjct:  212 QLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEVAKME--PLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKALMKEIPA----LLHLPVLIIMALAILS 348
The following BLAST results are available for this feature:
BLAST of TCONS_00061441-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLCC11.169e-1730.77Chloride channel CLIC-like protein 1 OS=Homo sapie... [more]
back to top