TCONS_00061466-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061466-protein
Unique Name	TCONS_00061466-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	706

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061466-protein ID=TCONS_00061466-protein|Name=TCONS_00061466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=706bp
MALCDHLTIWLNTFDGLEGLHQTPEDLSDGVAIAEVLTQIAPEWFDSDWM
SKIKQDISDNHRLKLSNMKKILKGMVDYYNEVLMQDLETFTCPDVSVIAE
FNNKDELGRMLQLVLGCAMNCEDKEQYIQAVMNLESDVQMTVMNCMQELM
ELRENSRLSADEPDYAANLRSPSFTSAEREQFNQKIHELQETVRKYREEN
STLQMENERLILGGGSNRKESERGADDKMVAQMQFQMDKMKEENFALESA
KDDFKLRYDLKEKEVHGLNDKIEQLSSLADEARSLKDEMDVLRHTQDKVA
RYEATIEAYKKKLGELGDMRQQMKTLEQKNEIYMQQTMSLEEDSKRANAL
KNQVELYKTQISDLHSKQMELEKRCDKAEFDAQRNKEKLLSTEAENERLK
QERDMLKETNEELTLNQHNSANVLQEGGKPEGLQGLEDLSIGDSPFEMKE
KLIRLEHQNKVLTLQLQEAENEKTHILQADLDIANEKVNRLETDNRQLNQ
EILELRGKVEDVEADKHVETQKTEAEEKAMKRKVDQHMQALQESNSELQR
KKKLIDDLETQTTANSSEITSLRDQLVKKDEQMKEMEDRYKNYLDKAKSV
IKTIDPKQQPAAVDGQEVSQLRDRLQEKEKLIESLERDHERMKATKEREE
KLIISAWYELSMQLHRKAADERQVGTSGLSFLAKQRQAASMRRTSLTSTP
RGKATA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038553	XLOC_038553	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061466	TCONS_00061466	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008636	Hook-related_fam

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 382..416
None	No IPR available	COILS	Coil	Coil	coord: 531..561
None	No IPR available	COILS	Coil	Coil	coord: 258..367
None	No IPR available	COILS	Coil	Coil	coord: 618..652
None	No IPR available	COILS	Coil	Coil	coord: 179..206
None	No IPR available	COILS	Coil	Coil	coord: 452..479
None	No IPR available	COILS	Coil	Coil	coord: 569..603
None	No IPR available	COILS	Coil	Coil	coord: 481..515
None	No IPR available	GENE3D	1.20.5.170		coord: 446..522 e-value: 0.0094 score: 15.5
None	No IPR available	GENE3D	1.20.5.50		coord: 531..653 e-value: 7.4E-4 score: 18.7
None	No IPR available	GENE3D	1.20.5.340		coord: 304..419 e-value: 0.011 score: 15.0
None	No IPR available	GENE3D	1.20.120.330		coord: 166..303 e-value: 3.7E-6 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 683..706
None	No IPR available	SUPERFAMILY	116907	Hook domain	coord: 3..154
IPR008636	Hook-related protein family	PFAM	PF05622	HOOK	coord: 3..695 e-value: 4.4E-213 score: 709.3

Blast

[Close]

BLAST of TCONS_00061466-protein vs. Swiss-Prot (Human)
Match: HOOK3 (Protein Hook homolog 3 OS=Homo sapiens GN=HOOK3 PE=1 SV=2)

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 320/703 (45.52%), Postives = 489/703 (69.56%), Query Frame = 0

Query:    3 LCDHLTIWLNTFDGLEGLHQTPEDLSDGVAIAEVLTQIAPEWFDSDWMSKIKQDISDNHRLKLSNMKKILKGMVDYYNEVLMQDLETFTCPDVSVIAEFNNKDELGRMLQLVLGCAMNCEDKEQYIQAVMNLESDVQMTVMNCMQELMELRENSRLSADEPDYAANLRSPSFTSAE-------REQFNQKIHELQETVRKYREENSTLQMENERLI-LGGGSNRKESERGADDKMVAQMQFQMDKMKEENFALESAKDDFKLRYDLKEKEVHGLNDKIEQLSSLADEARSLKDEMDVLRHTQDKVARYEATIEAYKKKLGELGDMRQQMKTLEQKNEIYMQQTMSLEEDSKRANALKNQVELYKTQISDLHSKQMELEKRCDKAEFDAQRNKEKLLSTEAENERLKQERDMLKETNEELTLNQHNSANVLQEGGKPEGLQGLED-LSIGDSPFEMKEKLIRLEHQNKVLTLQLQEAENEKTHILQADLDIANEKVNRLETDNRQLNQEILELRGKVEDVEADKHVETQKTEAEEKA-MKRKVDQHMQALQESNSELQRKKKLIDDLETQTTANSSEITSLRDQLVKKDEQMKEMEDRYKNYLDKAKSVIKTIDPKQQPAAVDGQEVSQLRDRLQEKEKLIESLERDHERMKATKEREEKLIISAWYELSMQLHRKAADERQVGT-SGLSFLAKQRQAASMRRT 694
            LC+ L  W+ TF+ ++   QT EDL++GV +A+VL +I P +FD +W+++IK ++ DN RLK+SN+KKILKG++DY +E+L Q +  FT PDV++I E ++  ELGRMLQL+LGCA+NCE K++YIQA+M +E  VQ  VM  +QELM   + S +SA    Y    R    T+ E       +E+  Q+ HEL   V   +EE S+L  EN+ L+     S+  E       +   Q+Q Q+++++EE F LE+AKDD+++R +  EKE+  L  + ++L++LADEA+SLKDE+DVLRH+ DKV++ E  +E+YKKKL +LGD+R+Q+K LE+KN +YMQ T+SLEE+ ++ANA ++Q+E YK Q+ +L ++  E  K+ DK +F+ +R KEK+ S + E +RL+ ERD LKET EEL   Q     +  +G  P G Q   D L+      E++EKLIRL+H+NK+L L  + ++NEK  +LQ+ LD AN + N LET+NR +NQ +LE++ +VE+++  K ++ Q ++AE+   +K+K+++H++ L E+N+ELQ+K+ +I+DLE +   +S +I  L++ L KK+E+MK+ME+RYK YL+KAKSVI+T+DPKQ   A    E+  L+++LQE+++L  SLE+++E+ K+ +E EEK I+SAWY + M LH+KAA++R   T SG SFLA+QRQA S RR+
Sbjct:   12 LCESLLTWIQTFN-VDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLIGEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMS--KESPVSAGNDAYVDLDRQLKKTTEELNEALSAKEEIAQRCHELDMQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKLNQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQ--KSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGA--APEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSSRRS 707

The following BLAST results are available for this feature:

BLAST of TCONS_00061466-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061466-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HOOK3	0.000e+0	45.52	Protein Hook homolog 3 OS=Homo sapiens GN=HOOK3 PE...	[more]

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TCONS_00061466-protein (polypeptide) - C. hemisphaerica