TCONS_00061469-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061469-protein
Unique NameTCONS_00061469-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length389

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061469-protein ID=TCONS_00061469-protein|Name=TCONS_00061469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MTLTTIEKQAIILIFLALDFTTCGRSDGVKTKNKGGVKYKAEPTPRKSGK
CQAEEASNRTAEYHRRREVNLRLLNRITSDGVPEDWDGTFPSGPTEDYKH
LVETGHKVQKESVLFPKLIENEPRCPRNHSKSYCVLFKSIPFPEKTVFQN
VEIRIAQKVLRDRRSRGRHTFWGGRRVNPHIIIQLLDERLATLKTMTSYF
VGRARSGTITIALKDIKDLIKVSEKSKRMKIFHAYLKFTCVGCFFEQKKK
DFSLGLPHIWYQKHNHVLEKVVKDCGPGYKGCCLENHWQEFKESYIGYPK
RYNMGRCRGSCDEHHDLDRKTISERIIKNHEEGNYVHLLSAILNKKDSKK
AKLCCVPKSYGKLPVLYMTKQSLTMKIVENVVITECGCA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038555XLOC_038555Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061469TCONS_00061469Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001839TGF-b_C
IPR029034Cystine-knot_cytokine
IPR017948TGFb_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008083 growth factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001839Transforming growth factor-beta, C-terminalSMARTSM00204TGFB_2coord: 282..389
e-value: 1.5E-6
score: 16.7
IPR001839Transforming growth factor-beta, C-terminalPFAMPF00019TGF_betacoord: 281..388
e-value: 1.4E-14
score: 54.7
IPR001839Transforming growth factor-beta, C-terminalPROSITEPS51362TGF_BETA_2coord: 261..389
score: 15.91
IPR029034Cystine-knot cytokineGENE3D2.10.90.10coord: 267..389
e-value: 3.4E-15
score: 56.0
IPR029034Cystine-knot cytokineSUPERFAMILY57501Cystine-knot cytokinescoord: 274..388
IPR017948Transforming growth factor beta, conserved sitePROSITEPS00250TGF_BETA_1coord: 296..311

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top