TCONS_00061486-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061486-protein
Unique Name	TCONS_00061486-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	896

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061486-protein ID=TCONS_00061486-protein|Name=TCONS_00061486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=896bp
MYIEFNQDGDVTVNAYNFLYISGRENDLLQLGHWYGNNSIEIDDELWGRS
NSVDPPKATCAFPCQPGTYKVAGSSACCWQCLQCYGDGITSTIDAPECQK
CKKIEVPSPNRDRCIPLTDMRLSFDSSTGQTVIAISLVGFVAATFVLCIF
IWYWNSPVVKSSSREISVIQLLCMILLFCYPVLFMFQASTFTCILRNVVF
CSLHTFILSFILLKTYRLLRVFQPKRFSKISKFLHNKYQLLTSFIFVIFV
LLVLTGWYYGHMPDVILHISKEEMGFIYHCGSHENIVLYCIVGFIIFLSL
ASGFMAFRARRLPSNFKEAQYIWLAMFISCLAWITMFPLYITQTQSVKPL
VLIGVNGASTVCMLLVLYGYKIHIILFQPHLNSTEHFSKLAINATVTTFM
KDADPSNNRAGSIPQNQQRQSSVISFDFDGMFDEYKNGKVRSRSAALKQS
FKHFPRSFRASKHQNAGKVNSPTKHHLTEKERKRQRLKAKNKTLQFPKRK
REEEXMGFIYHCGSHENIVLYCIVGFIIFLSLASGFMAFRARRLPSNFKE
AQYIWLAMFISCLAWITMFPLYITQTQSVKPLVLIGVNGASTVCMLLVLY
GYKIHIILFQPHLNSTEHFSKLAINATVTTFMKDADPSNNRAGSIPQNQQ
RQSSVISFDFDGMFDEYKNGKVRSRSAALKQSFKHFPRSFRASKHQNAGK
VNSPTKHHLTEKERKRQRLKAKNKTLQFPKRKREEELSKTMPPKSASFDD
GQTLSSKYPYKAEFFIDLDDNKPLGSRTGSDASLIKKMNNANVDRASSSP
NQSENTIDTTNQLYDSMRIKNSVRRNKIEKQQSVDSPLSDDYQSEERNDL
MNQSERKKMDQLDRSMEKSSQSNANVNGITNGFLRGMSLEDYDTFV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038570	XLOC_038570	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061486	TCONS_00061486	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C
IPR011500	GPCR_3_9-Cys_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 317..338 score: 34.23 coord: 156..178 score: 38.72 coord: 294..317 score: 32.03 coord: 201..222 score: 30.54
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 504..606 e-value: 5.6E-18 score: 65.5 coord: 141..374 e-value: 2.5E-36 score: 125.6
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 502..623 score: 20.991
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 128..391 score: 36.836
IPR011500	GPCR, family 3, nine cysteines domain	PFAM	PF07562	NCD3G	coord: 56..107 e-value: 1.1E-8 score: 34.8

Blast

[Close]

BLAST of TCONS_00061486-protein vs. Swiss-Prot (Human)
Match: GRM8 (Metabotropic glutamate receptor 8 OS=Homo sapiens GN=GRM8 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.086e-42
Identity = 110/412 (26.70%), Postives = 198/412 (48.06%), Query Frame = 0

Query:    3 IEFNQDGDVTVNAYNFLY-ISGRENDLLQLGHWYGNNSIEIDDELWGRSNSVDPPKATCAFPCQPGTYK-VAGSSACCWQCLQCYGDGITSTIDAPECQKCKKIEVPSPNRDRCIPLTDMRLSFDSSTGQTVIAISLVGFVAATFVLCIFIWYWNSPVVKSSSREISVIQLLCMILLFCYPVLFMFQAS--TFTCILRNVVFCSLHTFILSFILLKTYRLLRVF-QPKRFSKISKFLHNKYQLLTSFIFVIFVLLVLTGWYYGHMPDVILH------ISKEEMGFIYHCGSHENIVLYCIVGFIIFLSLASGFMAFRARRLPSNFKEAQYIWLAMFISCLAWITMFPLYITQTQSVKPLVL------IGVNGASTVCMLLVLYGYKIHIILFQPHLNSTEHFSKLAINATVT 397
            + FN++GD       F Y I+ +  +   +GHW     ++++D  W       P  + C+ PC+PG  K       CCW C +C  +G    +D   C+ C   + P+ NR  C  +  ++L + S      + ++++G +A TFV+  F+ Y ++P+V++S RE+S + L  + L  CY + F+  A+  T  C  R V       F  + +L KT R+ R+F Q K+     KF+    QL+ +F  +   LL +  W+    P +I+       +  E+   +  C    ++ L C +G+ I L +     A + R +P  F EA+ I   M+ +C+ W+   P++    QS + + +      + ++ +++V  L +LY  K++II+F P  N  +   K +  A VT
Sbjct:  459 VTFNENGDAPGRYDIFQYQITNKSTEYKVIGHWTNQLHLKVEDMQWAHREHTHP-ASVCSLPCKPGERKKTVKGVPCCWHCERC--EGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWAVVPVFVAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFL--CYSITFLMIAAPDTIICSFRRVFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPHIIIDYGEQRTLDPEKARGVLKC-DISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLTVSMSLSASVS-LGMLYMPKVYIIIFHPEQNVQKR--KRSFKAVVT 861

The following BLAST results are available for this feature:

BLAST of TCONS_00061486-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061486-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM8	1.086e-42	26.70	Metabotropic glutamate receptor 8 OS=Homo sapiens ...	[more]

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TCONS_00061486-protein (polypeptide) - C. hemisphaerica