TCONS_00061566-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061566-protein
Unique NameTCONS_00061566-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length566

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061566-protein ID=TCONS_00061566-protein|Name=TCONS_00061566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
MPSKPISVRVTTMDAELEFAIQPSTSGKQLFDQVVKTIGLREIWFFGLQY
VDTKGDTTWLKLNKKVTSQDIKKETPYQFKFRSKFFPEDVANELIQEVTR
KLIYYQVKDSILTEEVYCPPETSVLLSSYAMQVKYGDYKPETHTQGFLSK
DRLLPQRVLNQHKMSHSQWEERIVNWWAEHKEMLRDDAVLEYLKIAQDLE
MYGVNYFEIKNKKGTKLFLGVDALGLNIYEQSDKLTPKIGFPWSEIRNIS
FNDKKFVIKPIDKKAPEFVFYVDRLRINKRILSLSMGNHELYMRRRKPDT
IEVQQMKAQAREEKLAKQQERARLTREKQAREDAEREKLEMADRLRKFEE
EAKVAQQALDQAKEDAIRKEGLRKRAEEEAARLEELKRQAEIERQKLEEE
AASQRIAKEEYEQRAAAAAEEAERRAVEIEEKQREAERLQQELAESQRRE
DEQKQELLKIISTPPTIMVQTDEAEETSNEHGADLEEAEMDNRELEYTSE
QDKNERLKNQLASLSDELNQARDSAQLTHEDLLHEGNLKEGRDKYKTLRQ
IRQGNTRQRIDEFESL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038631XLOC_038631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061566TCONS_00061566Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000798Ez/rad/moesin-like
IPR019749Band_41_domain
IPR018980FERM_PH-like_C
IPR011259ERM_C_dom
IPR011993PH_dom-like
IPR019748FERM_central
IPR011174ERM
IPR018979FERM_N
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR019747FERM_CS
IPR000299FERM_domain
IPR008954Moesin_tail
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008092cytoskeletal protein binding
GO:0003779actin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0003779 actin binding
molecular_function GO:0008092 cytoskeletal protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 301..456
NoneNo IPR availableCOILSCoilCoilcoord: 485..524
NoneNo IPR availableGENE3D3.10.20.90coord: 6..83
e-value: 2.3E-33
score: 113.4
NoneNo IPR availableGENE3D1.20.5.450coord: 294..344
e-value: 1.8E-21
score: 75.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..566
NoneNo IPR availableCDDcd13194FERM_C_ERMcoord: 201..297
e-value: 6.75489E-68
score: 215.6
IPR000798Ezrin/radixin/moesin-likePRINTSPR00661ERMFAMILYcoord: 114..135
score: 68.18
coord: 70..89
score: 62.22
coord: 160..177
score: 49.69
coord: 285..304
score: 91.39
coord: 18..37
score: 81.94
coord: 521..542
score: 41.16
coord: 543..564
score: 84.85
coord: 210..230
score: 86.24
IPR019749Band 4.1 domainPRINTSPR00935BAND41coord: 187..203
score: 63.24
coord: 105..118
score: 41.67
coord: 118..138
score: 59.72
coord: 38..50
score: 63.14
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 2..207
e-value: 5.6E-79
score: 278.4
IPR018980FERM, C-terminal PH-like domainSMARTSM01196FERM_C_3coord: 211..300
e-value: 6.0E-33
score: 125.5
IPR018980FERM, C-terminal PH-like domainPFAMPF09380FERM_Ccoord: 211..299
e-value: 1.7E-25
score: 89.2
IPR011259Ezrin/radixin/moesin, C-terminalPFAMPF00769ERMcoord: 332..566
e-value: 7.8E-48
score: 163.3
IPR011993PH domain-likeGENE3D2.30.29.30coord: 203..293
e-value: 5.3E-25
score: 87.4
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 200..343
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 92..207
e-value: 2.2E-28
score: 98.9
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 99..199
e-value: 6.36292E-28
score: 106.562
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 90..199
IPR011174Ezrin/radixin/moesinPIRSFPIRSF002305ERMcoord: 1..566
e-value: 1.0E-244
score: 811.3
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 11..70
e-value: 1.1E-13
score: 50.8
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 89..162
e-value: 9.4E-21
score: 74.3
coord: 163..202
e-value: 3.1E-9
score: 36.7
IPR019747FERM conserved sitePROSITEPS00661FERM_2coord: 177..206
IPR019747FERM conserved sitePROSITEPS00660FERM_1coord: 59..89
IPR000299FERM domainPROSITEPS50057FERM_3coord: 6..296
score: 83.248
IPR008954Moesin tail domainSUPERFAMILY48678Moesin tail domaincoord: 487..566
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 3..88

Blast
[Close]
BLAST of TCONS_00061566-protein vs. Swiss-Prot (Human)
Match: RADI (Radixin OS=Homo sapiens GN=RDX PE=1 SV=1)

HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0
Identity = 361/584 (61.82%), Postives = 442/584 (75.68%), Query Frame = 0 
Query:    1 MPSKPISVRVTTMDAELEFAIQPSTSGKQLFDQVVKTIGLREIWFFGLQYVDTKGDTTWLKLNKKVTSQDIKKETPYQFKFRSKFFPEDVANELIQEVTRKLIYYQVKDSILTEEVYCPPETSVLLSSYAMQVKYGDYKPETHTQGFLSKDRLLPQRVLNQHKMSHSQWEERIVNWWAEHKEMLRDDAVLEYLKIAQDLEMYGVNYFEIKNKKGTKLFLGVDALGLNIYEQSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPEFVFYVDRLRINKRILSLSMGNHELYMRRRKPDTIEVQQMKAQAREEKLAKQQERARLTREKQAREDA-------EREKLEMADRLRKFEEEAKVAQQALDQAKEDAIRKEGLRKRAEEEAARLEELKRQAEIERQKLEEEAASQRIAKEEYEQRAAAAAEEAERRAVEIEEKQREAERLQQELAESQRREDEQKQELLKIISTPPTIMV---------QTDEAEETSNEHGADL-EEAEMDNR-ELEYTSEQDKNERLKNQLASLSDELNQARDSAQLTHEDLLHEGNLKEGRDKYKTLRQIRQGNTRQRIDEFESL 566
            MP KPI+VRVTTMDAELEFAIQP+T+GKQLFDQVVKT+GLRE+WFFGLQYVD+KG +TWLKLNKKVT QD+KKE P QFKFR+KFFPEDV+ ELIQE+T++L + QVK++IL +E+YCPPET+VLL+SYA+Q KYGDY  E H  G+L+ DRLLPQRVL QHK++  QWEERI NW  EH+ MLR+D+++EYLKIAQDLEMYGVNYFEIKNKKGT+L+LGVDALGLNIYE  DKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAP+FVFY  RLRINKRIL+L MGNHELYMRRRKPDTIEVQQMKAQAREEK  KQ ERA+L  EK+ RE A       EREK E+ +RL++ EE+   AQ+ L++    A+  +  RKRA+EEA RLE+ +R AE  +  + ++AA Q   +E+     A    +        ++K+ EA   Q +   +Q   ++ K+EL  ++S PP             + DE +E + E  A+L  E  M++R E E  +E  KNER+K QL +LS EL QARD  + T  D+LH  N+K GRDKYKTLRQIRQGNT+QRIDEFE++
Sbjct:    1 MP-KPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLKLNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQHKAFAAQEDLEKTKEELKTVMSAPPPPPPPPVIPPTENEHDEHDENNAEASAELSNEGVMNHRSEEERVTETQKNERVKKQLQALSSELAQARDETKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFEAM 583
The following BLAST results are available for this feature:
BLAST of TCONS_00061566-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RADI0.000e+061.82Radixin OS=Homo sapiens GN=RDX PE=1 SV=1[more]
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