TCONS_00061592-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061592-protein
Unique Name	TCONS_00061592-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	520

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061592-protein ID=TCONS_00061592-protein|Name=TCONS_00061592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MTSSNQGSLHTLGDEGAANYIEETLSDQEPLLSNEIPPPLHPDPFHNVPR
QADYENPPINPYYIQQSYDDRMKSTIYDEDTHCFSMSRVRRMFCLLSLFD
CLMTFLMWVIYLQLSDGGITDNLAPEVKNLTIHTSLFDIVLCSITRSLVL
LLFYSCLIKSTKWYAVALTTSASTIFLLMKVFLLKGEYYHKGNPINFFLI
IFSFIITWCEAWHFDFKVIPQELQTKNLGDIRTSSLPPIAGGSFLASDQQ
RRQNNRGGRSRFGAPSSFYTPYAGSNYYGGGKSHISEESEDDSQCSDISA
ELGRLSDQEDHALIRKANDTLHMVFRMLYISDGWNMCREEKDNIIVQSRN
FDGVGKVYKLEAVIDVNSSVLDQVFWVDVDSQPSWNASVKECRILRKINK
LSDIIYSVAAEAGGGIISSRDFVSLRRRKRKGPLTLLCNVSIETPLMPPV
SSIVRGKNGPGGWVLRDIPGEPNKTEFIWLLNTKLGGWLPQKLVETSLAG
VMVDTVRDIRQHVSTTLLPT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038641	XLOC_038641	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061592	TCONS_00061592	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002913	START_lipid-bd_dom
IPR023393	START-like_dom
IPR019498	MENTAL

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008289	lipid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	SMART	SM00234	START_1	coord: 315..519 e-value: 1.1E-12 score: 58.2
IPR002913	START domain	PFAM	PF01852	START	coord: 332..513 e-value: 1.0E-23 score: 83.7
IPR002913	START domain	PROSITE	PS50848	START	coord: 331..518 score: 30.705
IPR023393	START-like domain	GENE3D	3.30.530.20		coord: 291..516 e-value: 3.3E-38 score: 130.9
IPR019498	MENTAL domain	PFAM	PF10457	MENTAL	coord: 87..272 e-value: 1.4E-47 score: 161.7
IPR019498	MENTAL domain	PROSITE	PS51439	MENTAL	coord: 86..260 score: 21.986
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..267
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 315..513

Blast

[Close]

BLAST of TCONS_00061592-protein vs. Swiss-Prot (Human)
Match: STAR3 (StAR-related lipid transfer protein 3 OS=Homo sapiens GN=STARD3 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.206e-53
Identity = 133/433 (30.72%), Postives = 210/433 (48.50%), Query Frame = 0

Query:   85 SMSRVRRMFCLLSLFDCLMTFLMWVIYLQLSDGGITDNLAPEVKNLTIHTSLFDIVLCSITRSLVLLLFYSCLIKSTKWYAVALTTSASTIFLLMKVFLLKGEYYHKGNPINFFLIIFSFIITWCEAWHFDFKVIPQELQTKNLGDIRTSSLPPIAGGSFLASDQQRRQNNRGGRSRFGAPSSFYTP---YAGSNYYGGGKSHISEESEDDSQCSDISAELGRLSDQEDHALIRKANDTLHMVFRMLYISDGWNMCREEKDNIIVQSRNFDGVGKVYKLEAVIDVNSSVLDQVFWVDVDSQPSWNASVKECRILRKINKLSDIIYSVAAEAGGGIISSRDFVSLRRRKRKGPLTLLCNVSIETPLMPPVSSIVRGKNGPGGWVLRDIPGEPNKTEFIWLLNTKLGGWLPQKLVETSLAGVMVDTVRDIRQHVS 514
            ++S VRR FCL   FD L   L+W+I L  ++ GI  NL  E+      TS FDI + +  R   LLL Y+ L +   W+ +A+TT  S+ FL++KV L   E   KG    + L I SF++ W E W  DFKV+PQE + +       ++   +A G  L S         G  S       FY+P   +AGS+         +E  E+ +     SA        ++   IR+  +   +V ++L   + W   +  +    V +      GK + L+  +   + ++ Q   +  +    WN +V  C+IL+++   + I Y V+A A GG++S RDFV++RR +R+    L   ++      PP    VRG+NGPGG+++      P    F+W+LNT L G LP+ L+  SLA  M +    +RQ +S
Sbjct:   45 AISDVRRTFCLFVTFDLLFISLLWIIELN-TNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVL-RLRHWWVIAVTTLVSSAFLIVKVIL--SELLSKG-AFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEERW---YLAAQVAVARGPLLFS---------GALSE----GQFYSPPESFAGSD---------NESDEEVAGKKSFSA--------QEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLRQRIS 439

The following BLAST results are available for this feature:

BLAST of TCONS_00061592-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061592-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
STAR3	1.206e-53	30.72	StAR-related lipid transfer protein 3 OS=Homo sapi...	[more]

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TCONS_00061592-protein (polypeptide) - C. hemisphaerica